Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1789 ATGGATGCATCCACTATGAGGAGAAAGGTACAGAGGAAATCAAAAATCAGAGGTTACAGCCTCAAACTAGACGCTCTCGACGAAATTCTCTCCTTTGCCTCTCGCTTCCATGGCGAAGAAGACGCTGCTATCGATTTTATTCTCGACGAGCTCCACAGCGAATCCTTGCAATCTTCTATAATACACAAGGATGCGGTGCATCGGGCCGTCAGCGTTCTACTTGGAGCTGATGAAGTGGGAAAACAAAGTCCCGATACCATTACTAGTACATCCGCCCCTCGCATCATAGACGTTTTTGGTATCACCAGATTTCGTTATGATCCCATCAAGAAGATCTTCTACCAGCACACTGGAAGCCTTCCAATTCATGGGGATGCTTCAGCTAAAGCTGCTTTGTATCGAGATAGGTTTCTCTTGCTTTCCCAGAGGCTCTCCCGTGATCAACATTTCTCCAAACCCGCTTTCAACACTGGGATGTCTCATTTTGGAAGTTGTGAGATTTCTTCTATTCAGTCTTTGGTGGGGCAAACGGGGAGGAGATGGGTCATGGGAGTGATATCTCAGATGGAGGATGGCCACTTTTACTTGGAGGACCTTACTGCGTCTATGACGTGCAATACAATTTTCATTAACAATCCGCACAAGATAACTACAGGTCTATTTACTGAGAACACAATTGTTGTAGCAGAAGGAGAGATGCTCGTGGAGGGAATTTTTCAGGTTATTACTTGTGGATTTCCTCCGTTAGAGGACAGGGATAAGTCTCTTAAAATGCTAGCAGGCCAGGACTTCTTTGGAGCTGGTGCTCTAACTAAAGAGGAGACCCTCAGGCTTGCAGATCTGGAAAAGAGAGCCATTAATGATATGTTTGTCATTCTCTCTGACATTTGGTTAGATAGTGAAGAGGCCATGAGAAAACTAGAGACCATTCTTGATGGGTTTGAGAATGTGGAAGTGGTTCCTTCCTTATTTGTTTTGATGGGGAATTTTTGTTCCCGTCCATGTAATCTTGCCTTTAATTCTTTCTCAAGTCTCAGATTACAGTTTGGTAAGCTGGGAAAAATGATAGCAGCTCATCCACGATTAATAGAGAATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGACCATCAACAGTTCTACCCAGGTGTGCTTTGCCAAAGTACTTAACTGAAGAGCTTCGGATGCACGTCCCAAATGCCATCTTCTCAAGTAATCCTTGCAGGATCAAGTTCTACACCCAGGAAATTGTATTTTTCCGACAGGACCTACTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCTACAGAAGAAACAAGTGATCCTTTTGAACACCTTATTGCTACCATAACTCATCAAAGTCATCTATGTCCTCTTCCTTTGGTCATTCAACCAATTATTTGGAATTATGACCACTGTCTTCATCTATATCCAACTCCTCATGTGATAGTTCTAGGGGATAGAAGTAAGCAACAAGCATTTAAGTACACGGGAATCACTTGCTTCAATCCTGGGTCCTTCTCAAATGACGGCACTTTTGTGGCATATCGTCCTTGCAATCAAGAAGTTGAGTTGTCTGCCTTGTAA 1599 43.28 MDASTMRRKVQRKSKIRGYSLKLDALDEILSFASRFHGEEDAAIDFILDELHSESLQSSIIHKDAVHRAVSVLLGADEVGKQSPDTITSTSAPRIIDVFGITRFRYDPIKKIFYQHTGSLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFNTGMSHFGSCEISSIQSLVGQTGRRWVMGVISQMEDGHFYLEDLTASMTCNTIFINNPHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSLKMLAGQDFFGAGALTKEETLRLADLEKRAINDMFVILSDIWLDSEEAMRKLETILDGFENVEVVPSLFVLMGNFCSRPCNLAFNSFSSLRLQFGKLGKMIAAHPRLIENSKFLFIPGPDDAGPSTVLPRCALPKYLTEELRMHVPNAIFSSNPCRIKFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLIATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFSNDGTFVAYRPCNQEVELSAL 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19090578 19098610 + MC03g1347 Mch3g1789 684692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1789 532 PIRSF DNA_pol_epsilon_2 1 532 IPR016266 GO:0003677(InterPro)|GO:0006261(InterPro)|GO:0008622(InterPro)
Mch3g1789 532 Gene3D - 1 72 - -
Mch3g1789 532 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 4 532 IPR016266 GO:0003677(InterPro)|GO:0006261(InterPro)|GO:0006261(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0042276(PANTHER)
Mch3g1789 532 Pfam DNA polymerase alpha/epsilon subunit B 290 495 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1789 K02325 - csv:101207444 916.376