Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1802 ATGGTCTTCAAGGGCAGGTTCTTCTCGTCCTCAAAGAAGTCTGATTCTTCAAGCCCCGACGGATCCAGTCCCCGGTTCCTTGGTTCTAACTCACCCATCAGATCCGATAAGAAGAAGAATAAATCAGCCGCCAAAGATGAACCCCAGATTTCCAATACCAGTAGCAGCAGCTTCAGAGGTACCGTTCTGAAAGATGCTTCCCGGAGCAAGGATGGGAAACGAAAAGATAGTCAAGCTCAAATGCCGATCGGGACGCCCTCGAAGTCCGACCCAGTCTCCGGCTTGAACTCGGGGCCGAAGGCTAAGAAGTCGACTGATGTGAAGGACGTGGCCTCATCGGTTTCACCTATTCTAGCATCCTCCCTTGGACTGAATAGAATAAAGACAAGATCAGGCCCGTTGCCACAGGAGAGCTTTCTGGGTTTCAAAGGTGATAAAGGGTCATTGGGTTCGAGTAATCTTTCCAGGAACTGTGGCGATGGAAGCTCAGGCTCGAATTCAGGTTCTGCATGGTCGGGGTCTTCTAGTGGGGGAAAAAGAGAGGCGGCGAGTCAGAAAAGAATGGGTTTTCAGGACAATCTTAAAAGCTATATTCACAACGCTAGCAATTCCGAAAATACGCTAATCGCTAGTGCACCATCTACTGAACGGAGTCCAAATTCGTTAGGACAGCCTCGGTTACAGAATATGGAATCGTCCACTGAAGCCGGACACTATGAATCGGCATGGGGATCTTCTGAAGGATTAAGAAATTCAGATTTTTGTACGCCAGAGTCTTCTTATGATTGTGAAAATCCAAAGGAGTCTGAATCTCCGCGCTTTCAAGCTATACTTCGAGTCACAAGTGCTCCTCGAAGGAACTATCCCGTCGATATCAAAAGTTTTTCCCATGAACTAAATTCAAAAGGCGTACGACCATTCCCACTTTGGAAGTCACGCCGCTTAAATAATTTGGAGGAGATCTTAGTTATGATACGGGCAAAATTTGACAAGGCAAAAGAAGAAGTAAATTCTGATCTTGCTATTTTTGCTGCTGATCTGGTTGGAATTCTAGAAAAGAATTATGATACTCATCCAGAGCGGAAAGAGACAATTGAAGACTTGTTGGTTTTAGCTCGAAGCTGTGCCATGACATCTCCTGGTGAATTTTGGCTTCAGTGTGAAGGCATTGTTCAGGAATTGGATGATAGACGCCAAGAACTTCCTCCAGGCATGCTGAAACAACTTCATACTCGAATGCTGTTCATTCTCACTAGGTGTACCAGGTTGCTGCAGTTCCATAAAGAAAGTGGGTTAGCTGAAGATGAAAATGTTTTTCAGCTTCGTCAGTCGAGAAATCTGCATTCTGCTGATAAACGCATTCCTCCAACTATGGGAAGGGAAATGAAAAGCTTTACTGCAACAAAGACTTCTAAGACAACTTCATCCAGGAAATCTTATAGCCAGGAGCAGCGTGGCTTGGATTGGAGCAGAGAACATGATGTACTGCCTGGAAATAATGTCCCGACATCTCCTGATCCTTCAAAGAACTTGGTGTCTCCTACTGGCAGAGACCGGATGGCTTCTTGGAAAAGGTTGCCTTCTCCAGCAGCAAAAAGTGTGAAAGAGCCTACTTTGAAGGAGCAGGGTGATAGTAAGAAGTTCAAACCTTTGAATCTGTCTAAAGTCAGGACTGGTGTTTCTGAAACTGATTTGGTTGCTGCTAAGGTTTCCGAGCTTCCTCTACCCAGAGATTGTCATGATCAGCCTTCCAAGCACCAACATAAACCTTCTTGGGGTTGGGGTGATCAACCAACTGTATCTGATGAGAGTTCAATAATTTGTCGCATTTGTGAAGAAGAGATTCCTACTGCAAATGTTGAAGACCATTCAAGGATTTGTGCAGTTGCTGATCGATGTGATCAGAAGGGTGTAAGTGTTAATGAACGTCTACTTAGGATTGCTGAAACTCTAGAGAAGATGGTAGAGTCCTTCACGCAAAAGGATTCTCAACATGTAGGAAGTCCAGATGTTGCAAAAGTCTCAAATTCAAGTGTGACTGAAGAATCTGATATCTCCCCGAAACATAGTGATTGGTCTCGCAGGGGCTCAGAAGACATGCTTGATTGCTTTCATGAAACTGAAACTTCTGTTTTTATGGATGACTTAAAAGGTTTACCTTCCATGTCTTGTAAAACTCGTTTTGGTCCAAAGTCTGATCAGGGTATGACAACATCATCGGCTGGTAGTATGACTCCTAGATCTCCATTATTAACACCAAGAACCAGTCAGTTTGACTTATTCTTAGCGGGGAAAGGTGCTTACTATGAGCATGATGATCTTACACAGATCAATGATCTTGCAGATATTGCACGTTGTACGGCAAATACACTTCTGGGTGATGATTGCTCGATGCAATATTTGTTAACATACCTTGAAGACTTGAGAGTTGTCATTAACCGCAGGAAGTTTAATGCATTGACAGTTGACACTTTTGGCACTCGCATTGAGAAGTTAATCCGGGAAAAGTATTTGCAGCTTTGTGAGCTGGTGGATGATGAAAAGATTGACATAACAAGCACCATTATTGATGAAGATGCTCCTCTTGAAGATGACATTGTTCGTAGCTTAAGAACAAGCCCCATTCATTCTTCAAAGGACCGTACCTCAATTGATGACTTTGAGATTATAAAACCAATAAGTCGTGGGGCATTTGGTCGGGTTTTCCTGGCTAAAAAGAGGACAACGGGGGACCTTTTTGCTATAAAGGTTTTGAAGAAAGCTGACATGATTCGGAAGAATGCTGTTGAAAGTATTCTGGCAGAACGTGATATTTTAATATCTGTGCGCAACCCTTTTGTGGTTCGGTTCTTCTATTCTTTTACTTGTCGTGAAAATTTGTACCTCGTGATGGAGTATTTGAATGGAGGAGACCTTTACTCCTTGTTGAGAAATTTAGGCTGCTTAGATGAAGAGGTTGCTCGTGTATATATCGCAGAAGTTGTTCTTGCTTTGGAATATTTGCATTCACTTGGGGTAGTTCACAGGGATCTAAAGCCTGATAATTTATTAATAGCGCATGATGGCCATATTAAGCTGACAGATTTTGGACTTTCAAAGGTTGGTCTTATCAACAGTACTGATGATTTATCTGGACCCGTTGCTAGTGGGACCACTCTTCTTGGGTATGATGAGCCTACAATGTCTGCTTCTGAGCATCAACAAGAAAGACGGAAGAAGCGTTCTGCTGTTGGCACACCAGACTATTTGGCTCCAGAAATACTATTAGGAACTGGACATGGTGCCACAGCTGATTGGTGGTCTGTTGGGATCATTTTATTTGAACTAATTGTTGGCATCCCACCCTTCAATGCAGAGCATCCCCAGACTATATTTGATAACATTCTCAACCGTAAGATCCCTTGGCCTCAGATACTTGAAGAAATGAGCCCTGATGCTCAAGATTTAATTGATCGGTTATTGACGGAAGATCCTCATCAACGGCTTGGAGCTAGAGGCGCATCTGAGGTGAAGCAGCACATGTTCTTTAAAGATATTAACTGGGACACACTTGCCCGACAAAAGGCTGCATTTGTTCCAACATCTGAAAGTGCTCTTGATACTAGTTATTTTACAAGTCGCTACTCATGGAATCATTCTGATGATCAAGTCTATCCACCCAGCGAACTTGAGGATTCTAGTGATGCTGACAGCTTAAGTGGTAACAGTAGTTTGAGCAATCGTCAAGATGAAGTGGGAGATGAATGTGGGGGCCTGACAGATTTTGAGCCTGGTTCTTCGGTCAATTACTCATTCAGTAATTTCTCTTTCAAGAATCTCTCCCAGCTTGCATCCATCAATTATGACCTGCTTTCTAAGGGTTTGAAGGATGATCCTCCCAATCATGATGTATGA 3894 43.25 MVFKGRFFSSSKKSDSSSPDGSSPRFLGSNSPIRSDKKKNKSAAKDEPQISNTSSSSFRGTVLKDASRSKDGKRKDSQAQMPIGTPSKSDPVSGLNSGPKAKKSTDVKDVASSVSPILASSLGLNRIKTRSGPLPQESFLGFKGDKGSLGSSNLSRNCGDGSSGSNSGSAWSGSSSGGKREAASQKRMGFQDNLKSYIHNASNSENTLIASAPSTERSPNSLGQPRLQNMESSTEAGHYESAWGSSEGLRNSDFCTPESSYDCENPKESESPRFQAILRVTSAPRRNYPVDIKSFSHELNSKGVRPFPLWKSRRLNNLEEILVMIRAKFDKAKEEVNSDLAIFAADLVGILEKNYDTHPERKETIEDLLVLARSCAMTSPGEFWLQCEGIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDENVFQLRQSRNLHSADKRIPPTMGREMKSFTATKTSKTTSSRKSYSQEQRGLDWSREHDVLPGNNVPTSPDPSKNLVSPTGRDRMASWKRLPSPAAKSVKEPTLKEQGDSKKFKPLNLSKVRTGVSETDLVAAKVSELPLPRDCHDQPSKHQHKPSWGWGDQPTVSDESSIICRICEEEIPTANVEDHSRICAVADRCDQKGVSVNERLLRIAETLEKMVESFTQKDSQHVGSPDVAKVSNSSVTEESDISPKHSDWSRRGSEDMLDCFHETETSVFMDDLKGLPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQFDLFLAGKGAYYEHDDLTQINDLADIARCTANTLLGDDCSMQYLLTYLEDLRVVINRRKFNALTVDTFGTRIEKLIREKYLQLCELVDDEKIDITSTIIDEDAPLEDDIVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPVASGTTLLGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGATADWWSVGIILFELIVGIPPFNAEHPQTIFDNILNRKIPWPQILEEMSPDAQDLIDRLLTEDPHQRLGARGASEVKQHMFFKDINWDTLARQKAAFVPTSESALDTSYFTSRYSWNHSDDQVYPPSELEDSSDADSLSGNSSLSNRQDEVGDECGGLTDFEPGSSVNYSFSNFSFKNLSQLASINYDLLSKGLKDDPPNHDV 1297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19220445 19266333 + MC03g1356 Mch3g1802 684705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1802 1297 MobiDBLite consensus disorder prediction 463 483 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 1215 1253 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 1 187 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 575 598 - -
Mch3g1802 1297 Pfam Protein kinase domain 888 1176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1802 1297 SMART serkin_6 887 1176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1802 1297 MobiDBLite consensus disorder prediction 108 127 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 148 181 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 659 693 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 447 547 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 660 683 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 1057 1076 - -
Mch3g1802 1297 CDD STKc_MAST_like 893 1181 - -
Mch3g1802 1297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1006 1018 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch3g1802 1297 MobiDBLite consensus disorder prediction 1226 1243 - -
Mch3g1802 1297 SUPERFAMILY Protein kinase-like (PK-like) 884 1225 IPR011009 -
Mch3g1802 1297 ProSiteProfiles AGC-kinase C-terminal domain profile. 1177 1280 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1802 1297 MobiDBLite consensus disorder prediction 727 749 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 211 246 - -
Mch3g1802 1297 FunFam probable serine/threonine protein kinase IREH1 885 974 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 9 30 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 46 63 - -
Mch3g1802 1297 Coils Coil 641 661 - -
Mch3g1802 1297 MobiDBLite consensus disorder prediction 80 100 - -
Mch3g1802 1297 Gene3D Transferase(Phosphotransferase) domain 1 971 1194 - -
Mch3g1802 1297 Gene3D Phosphorylase Kinase; domain 1 885 1205 - -
Mch3g1802 1297 ProSiteProfiles Protein kinase domain profile. 887 1176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1802 1297 PANTHER SERINE/THREONINE-PROTEIN KINASE 594 1272 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Mch3g1802 1297 Coils Coil 315 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1802 Mch-Chr3:19220445 Mch6g2545 Mch-Chr6:27350844 0 dispersed
Mch3g1802 Mch-Chr3:19220445 Mch11g0433 Mch-Chr11:2716606 7.92E-76 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77297 PF00069 Pkinase 2.20E-65 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1802 K08789 - csv:101214945 2283.45