Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch3g1803 CTTCGCACTCTGAGTCTTAGACTCAACGCATTGACCGGTCAGCTGCCTTCAGATCTCGCTGCATGTACTAGTCTTCGCAACCTCTACTTGCAGGGCAATAGATTTTCTGGTCACATTCCCGAGTTTGTTTTCCAATTTCTTGACCTTGTACGCCTTAATCTGGCTTCCAACAACTTCTCTGGCGTCCTTGCTCCGGGTTTCGACAGACTCCTGCGGTTGAAGACCCTGTTCCTTGAGAAAAATCGGCTTATTGGCTCAATACCGGATTTAAACCTCCCCAACCTCGAGCAGTTCAATGTTACCGACAACTTTCTCAATGGCTCGGTTCCCCGTCGTTTGCAGTCATTTCCCTCTACTGCTTTCAGTGGTAACCAACTTTGCGGGCGTCCCCTTCAGGCTTGCTCTACAAATGTTATAGCACCACTCACCGTGGATATTGATGTTGACGAGAACAAGAGAAATAAAAAGCTATCTGGGGGAGCCGTGGGTGGGATCGTGATGGGGTCTGTGTTGAGTTTCATTTTGTTTTGTATGATTTTGATGTTTTCTTGCCGGAAGAAGAGCAGCCAGAAGACGAGTACTGTGGACATCGCAACCCTTGAGAAGCCGGCTTGCGAAGAGAATGAAGTGTTGGGTAAGGGAACCTTTGGAACAGCTTACAAAGCAGTCCTGGAGATTGGGCCTGTCGTGGCTGTAAAGAGATTGAAGGATGTGAACATTTCTGCGACAGAATTCAGGGAGAAAATTGATGCAGTGGGAGCCATGGATCATGAAAATTTGGTTCCTCTTAGAGCTTATTATTACAGCGTTGACGAGAAGCTTCTGGTCCATGATTACATGCCTATGGGAAGCTTATCTGCTCTTCTCCATGGAGCTGGTAAGACTCCACTGAACTGGGATATAAGGTCTGAAATTGCATATGGGGTTGCCCGTGGCATCAAGTACTTGCATTCTCAAGGCCCAGATGTTTCCCATGGGAACATAAAGTCATCCAACGTTTTGCTCACAAAATCCTACAATGCCCGAGTCTCTGATTTTGGCCTAGCGCAATTGGTTGGCCCACCCTCCAGTCCTAACAGAGTTGCGGGCTATCGTGCACCGGAGGTGACAGATCCTCGGAAGGTATCGCAAAAGGCAGATGTATATAGCTTTGGCGTCTTGCTGCTGGAGCTTTTGACGGGAAAAGCTCCCAGTCATGCAGTTTTGAATGAGGAAGGGGTGGACCTACCAAGATGGGTGCAATCAGTGGTACAAGAGGAGTGGAGGTCGGAAGTTTTCGATGTTGAACTGCTGAGTGTTGAGGAGGAGATGGTTCAAATGTTAGAGCTCGCTCTGGACTGTGCGGCACGGTATCCAGATAGACGGCCTTCAATGTATGAAGTGACGAGTCGCATT 1395 48.32 LRTLSLRLNALTGQLPSDLAACTSLRNLYLQGNRFSGHIPEFVFQFLDLVRLNLASNNFSGVLAPGFDRLLRLKTLFLEKNRLIGSIPDLNLPNLEQFNVTDNFLNGSVPRRLQSFPSTAFSGNQLCGRPLQACSTNVIAPLTVDIDVDENKRNKKLSGGAVGGIVMGSVLSFILFCMILMFSCRKKSSQKTSTVDIATLEKPACEENEVLGKGTFGTAYKAVLEIGPVVAVKRLKDVNISATEFREKIDAVGAMDHENLVPLRAYYYSVDEKLLVHDYMPMGSLSALLHGAGKTPLNWDIRSEIAYGVARGIKYLHSQGPDVSHGNIKSSNVLLTKSYNARVSDFGLAQLVGPPSSPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPSHAVLNEEGVDLPRWVQSVVQEEWRSEVFDVELLSVEEEMVQMLELALDCAARYPDRRPSMYEVTSRI 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19272850 19274932 - MC03g1357 Mch3g1803 684706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch3g1803 465 ProSitePatterns Protein kinases ATP-binding region signature. 211 233 IPR017441 GO:0005524(InterPro)
Mch3g1803 465 PANTHER OS05G0588300 PROTEIN 1 465 IPR050994 -
Mch3g1803 465 Gene3D Ribonuclease Inhibitor 1 139 IPR032675 -
Mch3g1803 465 Pfam Protein kinase domain 206 461 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1803 465 Pfam Leucine Rich Repeat 24 43 IPR001611 GO:0005515(InterPro)
Mch3g1803 465 Pfam Leucine Rich Repeat 49 70 IPR001611 GO:0005515(InterPro)
Mch3g1803 465 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 87 - -
Mch3g1803 465 SUPERFAMILY Protein kinase-like (PK-like) 206 463 IPR011009 -
Mch3g1803 465 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 280 465 - -
Mch3g1803 465 Gene3D Phosphorylase Kinase; domain 1 180 279 - -
Mch3g1803 465 ProSiteProfiles Protein kinase domain profile. 205 465 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch3g1803 465 SUPERFAMILY L domain-like 1 131 - -
Mch3g1803 465 Gene3D Transferase(Phosphotransferase) domain 1 280 465 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1803 Mch-Chr3:19272850 Mch8g2297 Mch-Chr8:26130326 3.08E-159 dispersed
Mch3g1803 Mch-Chr3:19272850 Mch3g1575 Mch-Chr3:17751555 1.26E-183 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77298 PF00069 Pkinase 4.10E-40 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch3g1803 - - - 0.0