Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0019 TCTGTTGTCCTGATCATTCTCTCTTCCGTAGCTTCCGGCAGCCGGGAGTGTAGCTGCGATTCCGATGCGGCGGAGCACAGCGCAGAGGCAGAGGAAGCAATCAAATACAAGGTGGGTTCGATTGCTTCGGTACTCGTGGCCGGCGCTGCGGGGGTGAGCCTTCCTTTAGTGGGCAAGAAGATTCCGTCTCTGAGGCCTGAAAATGACATTTTCTTCATGATCAAGGCCTTTGCTGCGGGGGTGATTTTAGGGACTGGGTTCATCCACATACTGCCGGATGCGTTCCAAGACTTGACATCGCCCTGCATCGGCCACCACCCTTGGGCTAACTTCCCATTTGCGGGATTCATTGCGATGGCCTCCTCCATCGGCACCCTTATGGTGGACACATTTGCAACCAGCTTCTACGAGAGACGCCACTTTAGTAAAACCAAGCAGCTCGTGCTCGTCACACGCCAGGAAACAGACGAGGAGCATGCGGGTCACGTGCATGTGCACACGCACGCCACGCATGGCCACGCTCACGGCTCCCGCTCCGCCGCACCCTCCGCAGAGTTGACTCTGCCTCAGCTAATTCGCTACCGGATTATATCTCAGGTGTTGGAATTGGGAATCGTGGTTCATTCAGTAATAATTGGGATATCTCTTGGTGCTTCTCAGAGCCCTGCGACCATTAAGCCACTGCTCCTCGCTCTGTCTTTCCACCAGTTTTTTGAAGGCATGGGACTCGGTGGCTGCATTTCCCAAGCAGAATTCAGGTGGCGGTCAGCGGCAGCAATGGCGACGTTTTTCTCAGTGACAGCGCCGGTGGGAATTGCAGTGGGAATCGGAATCTCGGGAGTTTACAGAGAGAACGGGCGGACGGCTCTGATCGTGGAAGGGAGCATGAACTCGGCATCGGCAGGGATATTGATATACATGGCGCTGGTGGACCTTCTTGCCGCGGATTTTATGAACCCAAGGATGCAAACCAACGTGGGGCTCCAAGTAGGAGCCCATATCTCTCTTCTTCTGGGTGCTGCCTGCATGTCTGTATTGGCCACATGGGCT 1050 55.14 SVVLIILSSVASGSRECSCDSDAAEHSAEAEEAIKYKVGSIASVLVAGAAGVSLPLVGKKIPSLRPENDIFFMIKAFAAGVILGTGFIHILPDAFQDLTSPCIGHHPWANFPFAGFIAMASSIGTLMVDTFATSFYERRHFSKTKQLVLVTRQETDEEHAGHVHVHTHATHGHAHGSRSAAPSAELTLPQLIRYRIISQVLELGIVVHSVIIGISLGASQSPATIKPLLLALSFHQFFEGMGLGGCISQAEFRWRSAAAMATFFSVTAPVGIAVGIGISGVYRENGRTALIVEGSMNSASAGILIYMALVDLLAADFMNPRMQTNVGLQVGAHISLLLGAACMSVLATWA 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 137587 139182 - MC04g0017 Mch4g0019 684731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0019 350 PANTHER ZINC/IRON TRANSPORTER 33 349 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Mch4g0019 350 Pfam ZIP Zinc transporter 35 347 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Mch4g0019 350 NCBIfam ZIP zinc/iron transport family 19 350 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0941 Mch-Chr11:6447182 Mch4g0019 Mch-Chr4:137587 4.35E-116 dispersed
Mch11g0942 Mch-Chr11:6452478 Mch4g0019 Mch-Chr4:137587 9.08E-125 dispersed
Mch2g0827 Mch-Chr2:5673184 Mch4g0019 Mch-Chr4:137587 3.10E-70 dispersed
Mch3g0844 Mch-Chr3:12453090 Mch4g0019 Mch-Chr4:137587 6.81E-98 dispersed
Mch4g0019 Mch-Chr4:137587 Mch8g0570 Mch-Chr8:4064299 6.91E-88 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0019 K14709 - csv:101216720 470.7