Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0034 ATGGGGAAAAAGAGCGCTAACCAGAAACAGAAGGTAATCCTACCGCCGGAACTTCCACCAGAGGTTACCGAGGAGGAAATTGAGGTCTCCGATGAGGACTTGCAGTTTGTCAACAAGAACCGAGACTATGCTCGCTTCGTTACCGGTCTAGACACTCAATCCATTACCAAGCATGTTACGCGTGTTGCTGATGTTGAAGAAGATGCTTTGGAGGCATTATACGAGAAACGTTTGCGCAAGAAGTCACTGCAGAAGCCCGAGGAGGAAAATAAGCTCCAGGTTCATCGTGTAGATGCCCTTCCTGTCAAAACACTTGACGGGAAACTCTACTACCGAACATCAAAAACATCCGATGCACCTGAAAATGATGGGAAGGATGGGGTAGTCGATGAGGAACAGGTCGATAATAGTATATTGAAGTTAACCAAAGCAGAAAAGAGGGCAAAGCTGAAAAAAATTAAGAAGGTTGCCAAGAAACAAGAGGAGTTAACGAAAGCTGAAGAAGTTCAACCAACCCCACAAGCAGCAGTTCTGGCCGAGGTGAAAGAGGATCTCACTGCTGAAAAGGCATTTGAAAGTAAGAAGCAGAAACTTGCAGAGCTAGGAATTGAATTGCTGGCAGATCCAAATTCCAATATTAAATCTCTGAAGGAGATGCTACAGATTGCTAAGGATAGTGATCAAGCAATTGTGAAACTTGGACTTCTCTCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTACCGGATTAGGCTTCCCACAGAAAAGGAGCTAGAAATGAAAGTATCCAAGGATGTTAAGAAAATGCGGTATTATGAGTCCACTCTTCTTACTGTTTATAAGGGATACCTACAGAAGCTAATATCATTAGAAAAGACGACGTCATTTCAGCACGTAGTTATTCGCTGTATTTGTACTTTGCTTGATGCAGTTCCCCACTTTAACTTTCGGGAGACGTTGTTAGGTATAGTGGTGAAAAACATAAGCTCCCCTGACGATGTTGTAAGAAAACTTTGTTGTGGTGCTATTAAGTCTTTATTTATCAATGAGGGAAAGCATGGTGGTGAAGCGACTGTGGAGGCTGTTCGGTTGATTGCTAACCATGTGAAATATCATGACTGCCAATTACACCCTGATTCCATCGAGCCTTTCGGACATTTAACATTTGACGAGGATCTGGGGAAAGCAGAAAAGACAGACGAACATAGTAAAGTGAAGAACAAAAAACATAAGAAAATAAAGAATCGCAAGGAATCAAGTAATTTGCAAGGGAATGATGGAAGACAAAGTATGAGGACAAAGATAACAGAAGAGGTTGCTGCTGATTACAGGGCTGCTTCTCTTGCCCCAGATGTGATGAAGCAGAGAGAGATGCAATCAGATACACTCTCTGCCGTGTTTGAAACATATTTTCGGATCTTAAGGCATACAATGCATTCAATTACTGCTAAGCCTGAAGCAAGTATTACTGCATCTACCACTAGCCCATTTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGATTGGGGAAATTCTCACATCTCATCGATTTAGATTTCATGGGTGATCTTATGAATTATCTGAAAAGGCTTGCTTCTGGTGGTGATAATTCTTCTGAGAAACAGTCGCAATGTTTGACTGTGCCTGAGCGTCTTCAGTGTTGCATTGTGGCGTTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTGCAGGACTTTTTTGTCCAGCTGTACAATATTTTACTCGAGTACAGGCCTGGGAGAGATCATGGTGAAGTGTTAGCTGAAGCTTTGAAGATAATGCTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGCTTTGGATCCGCAGAGTCGTTGGCAGCCTTGGTCACCGTAAAGCATCTTCTTCAGAAAAATATCAAGTGCCGCAACCTTTTGGAAAATGATGCTGGAGGAGGCTCAGTATCTGGCTCAGTTGCGAAATATCAGCCGTATGCCTCCGATCCAAATTTAAGTGGTGCCCTTGCATCTGTTCTTTGGGAACTTGATCTTCTGTGGAAGCATTATCATCCAACTGTCTCAACAATGGCTGCAAGCATATCAAGCATGAATAATGCTCAAAACCAAGTTTATGTCGCCACTGTTTCTCCTCAACAGGCTTTCAAAGAGTTGTCGTTGGAACAGGAGTCTTTCAACCCACAATTTAACGTCAGAAAAGCTAACAAGAGAAAAAGAGGTAGCGAGTCTTCTCAGTCTTCTCTCGATACGTGCAGTGCCATTGACGAAAATGAGGTGAAGGAGAAGCTTTCAACAAGATTCAGTCTTCTCCGGGATATCAAGGAAAACGAAAGATTGAGGGCCGACTTGGGCCGCACCACTCTGTCTTTGCAGCTATATGAAGAATACAAAAGGCAGAAGAAAAGAACTAAAAAGTCAAGAAATATTTGA 2484 42.31 MGKKSANQKQKVILPPELPPEVTEEEIEVSDEDLQFVNKNRDYARFVTGLDTQSITKHVTRVADVEEDALEALYEKRLRKKSLQKPEEENKLQVHRVDALPVKTLDGKLYYRTSKTSDAPENDGKDGVVDEEQVDNSILKLTKAEKRAKLKKIKKVAKKQEELTKAEEVQPTPQAAVLAEVKEDLTAEKAFESKKQKLAELGIELLADPNSNIKSLKEMLQIAKDSDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKDVKKMRYYESTLLTVYKGYLQKLISLEKTTSFQHVVIRCICTLLDAVPHFNFRETLLGIVVKNISSPDDVVRKLCCGAIKSLFINEGKHGGEATVEAVRLIANHVKYHDCQLHPDSIEPFGHLTFDEDLGKAEKTDEHSKVKNKKHKKIKNRKESSNLQGNDGRQSMRTKITEEVAADYRAASLAPDVMKQREMQSDTLSAVFETYFRILRHTMHSITAKPEASITASTTSPFGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGDNSSEKQSQCLTVPERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNILLEYRPGRDHGEVLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVKHLLQKNIKCRNLLENDAGGGSVSGSVAKYQPYASDPNLSGALASVLWELDLLWKHYHPTVSTMAASISSMNNAQNQVYVATVSPQQAFKELSLEQESFNPQFNVRKANKRKRGSESSQSSLDTCSAIDENEVKEKLSTRFSLLRDIKENERLRADLGRTTLSLQLYEEYKRQKKRTKKSRNI 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 251593 258714 + MC04g0031 Mch4g0034 684746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0034 827 MobiDBLite consensus disorder prediction 749 768 - -
Mch4g0034 827 Coils Coil 143 163 - -
Mch4g0034 827 SUPERFAMILY ARM repeat 216 629 IPR016024 -
Mch4g0034 827 PIRSF Noc3 3 825 IPR016903 -
Mch4g0034 827 MobiDBLite consensus disorder prediction 397 431 - -
Mch4g0034 827 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 6 765 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
Mch4g0034 827 Pfam Nucleolar complex-associated protein 194 284 IPR011501 -
Mch4g0034 827 Pfam CBF/Mak21 family 554 709 IPR005612 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0034 K14834 - csv:101213821 1330.08