Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0037 ATGGCGTCTTCGCCGTTGTTACTCTTCTTCTTTGCTCTTTGTGCTACTGTTTCCATCATCAGCCACCTGATTGTTTTCTCTGAAGCTCAGAATTCAACTCAACCCACCACCGATCCTGCTGAAGCAAGAGCTCTGAATTCCATATTTAGACAATGGCGTATATCGGCGCCATCAGGGGCTTGGAATATAAGTGGGAATCTGTGCAGTGGGAGGGCGGTCGACACCACCACCACTATCGAAACTGGTGGAAACCTTAATCCGTTTATAAAATGCGATTGCTCGGCCAACAATGGCGCTACTTGCCACATTACTGAACTGTTCGTTTATGCAATAAATGTTGTTGGTGTACTCCCACCAGAGCTATGGACGTTAACTTCCCTCACCTTTCTGAAGTTGGATCAAAATGTCTTGTCAGGGACGCTGTCTGCATCTGTTGGTAATCTCACACAATTACGAACCTTGAGTCTTGGCATTAATGCATTATCAGGAGAACTGCCAAAGGAACTTGGATCTCTTTCTAATCTGAGACTATTGGCTTTTGGGTCCAACAATTTCTCTGGTTCCTTACCATCAGAGCTTGGGAATCTTTCTATGCTAGAGGAACTGTACATTGATAGCTCTGGAGTTTCTGGTGATATTCCTCAATCATTTTCCAGTCTCAGAAACTTGCGTACAGTATGGGCATCGGACAATGAATTCACTGGCAGAATACCTGATTTCATCGGGAATTGGTCAAGGCTCACATCTTTGAGGTTTCAAGGAAACTCTTTTACAGGTCCCATACCATCGACATTTTCAAACCTGACATCTTTGACTGAGTTGAGAATAGGTGATTTATCCAATGGGAGCTCTTCATTGGCATTCATCAGTAATATGAAATCTCTAACTCTCCTTGTGTTGAGAAATAATAATATATCAGGTTCAATTCCATCCAACGTTGGAGAATTTCAAAGACTTACCCAGCTGGACTTTAGCTTCAACAACTTGACAGGAGAGATTCCAAGCTCGCTTTTCAATTTGAGTTTACTGTCACACTTGTTCCTTGGAAATAACAAGTTAAATGGGACCATACCTACACAGAAAAGTGCATCTCTTCTTAATATAGACTTGTCATATAATGATTTATCTGGGAGCTTTCCTTCTTGGATCAATCAGCCGAACTTACAGCTTAATTTAGTTGCCAACAACTTTACAATTGACAGTTCAAGTAACAGTGGTTTGCCATCTGGATTGGATTGTCTTCAACGCAACTTTCCTTGTAATCGAGGTCGTGGAATATATTCTGATTTTGGGATCAAGTGTGGAGGTCCACAGATAAGAGGTTCATCTGGGATTTTGTTTGAAAGGGAAAATGAGACTCTTGGTCCAGCTACGTACTTTGTTACTGGGACAAAGAGGTGGGCCGTTAGTAATGCGGGATACTTTACTGGCTCCAACAATCCGCGATACCAAGGCAATACATTGTCTCAATTTCCAAACACCATTGACACGGAACTTTTTCAGACACAGCGGCTATCTGCTTCATCATTAAGATACTATGGACTGGGGCTTGAGAATGGCAACTACACTGTGAATCTTCAGTTTGCAGAAATAGCTATCCCAAATTCAAATACATGGCAAAGCCGTGGGAGGCGTGTCTTTGATATATATATCCAGGGAAATCGTGTCTTACAGAATTTTGATATTAGAAGGGAGGCAGGTGGGTCTTTCCTTGCTGTTGAAAAGAAATTTACGGCTCAAGTTACAGAAAACTTCCTGGAAATTCATCTTTTTTGGGCGGGGAAAGGTACCTGCTGCATACCTGAGCAGGGCACTTATGGGCCTTCTGTTTCAGCCATCAGTGCTACCCCAGATTTTGTACCAACTGTCAGTAATGTACCTCCAAGTACGAAGGAGAATAGAACAGGCCTAATTGTAGGGCTCGTTGTTGGTTTAGGATCTGTTTTCTTTCTGATTATTGGTGCAGTTTTCATTATTGTCCAGAGAAGGAAAAGGCGCCGTGCCTATGAAGATGAAGAGCTCCTAGGAATAGATGCTAGACCGTACACATTTAGTTTTTCTGAACTAAGGGGTGCTACAGAGGACTTCAATTCATCCAACAAGCTTGGCGAGGGAGGATTTGGACCTGTTTACAAGGGAACACTAAGTGATGGAAGAGTGGTTGCTGTGAAGCAACTTTCTGTTGCATCCCACCAAGGAAAGAGCCAGTTTGTTGCTGAGATTGCTACAATATCTGCAGTGCAACATCGTAACCTTGTGAAACTATATGGATGTTGCATTGAGGCCGATAAACGTCTCCTTGTTTACGAGTTCCTGGAAAATAAGAGTCTTGACCAAGCATTATTTGAGAAAAGACATTTGATTCTTGATTGGCCAACACGTTTTGACATATGCGTGGGTGTAGCAAGAGGTCTCACTTACCTTCACGAGGAATCAAGACTTCGCATTGTGCACAGAGATGTAAAGGCCAGTAACATTCTGCTTGACGGTGATCTGACCCCCAAAATTTCAGATTTTGGCTTAGCCAAACTTTATGATGACAAAAAGACTCATATTAGCACCCGTGTTGCTGGGACAATTGGTTATCTTGCACCCGAGTATGCCATGCGTGGCCACCTGACGGAGAAGGCTGATGTCTTTGGATTTGGCGTTGTGGCTCTAGAACTTGTCAGTGGAAGGCCAAATTCAGATCCGAGCTTAGAGCAAGACAAAGTTTATCTTCTCGAATGGGCATGGTACCTCCACGAGAACAACCAGGAACTTGAGATGGTGGATTTTGAATTATCAGAGTTCAGCGAGGAAGAAGTGAAACGGGTGATCGGTGTAGCTCTTCTGTGCACTCAAACATCCCCAGGTCTTCGGCCATCAATGTCTCGCGTGGTGGCGATGCTGACCGGAGACATTGAAGTGGCCACCGTAACTTCAAAACCAGGATACTTAACAGACTGGAAATTTGATGACATTACAAGCTTTATAGATAATCCATCCACTGAAGAACCTGATACTGGCCGTTATGCGTCGACAAGTTCGAGTATCGTTGATACAAAGCACTCGCCAACTAATGTTTCTGAACCAATGCTTCGTGGATTATTAGGGGAGGGTAGGTGA 3108 43.37 MASSPLLLFFFALCATVSIISHLIVFSEAQNSTQPTTDPAEARALNSIFRQWRISAPSGAWNISGNLCSGRAVDTTTTIETGGNLNPFIKCDCSANNGATCHITELFVYAINVVGVLPPELWTLTSLTFLKLDQNVLSGTLSASVGNLTQLRTLSLGINALSGELPKELGSLSNLRLLAFGSNNFSGSLPSELGNLSMLEELYIDSSGVSGDIPQSFSSLRNLRTVWASDNEFTGRIPDFIGNWSRLTSLRFQGNSFTGPIPSTFSNLTSLTELRIGDLSNGSSSLAFISNMKSLTLLVLRNNNISGSIPSNVGEFQRLTQLDFSFNNLTGEIPSSLFNLSLLSHLFLGNNKLNGTIPTQKSASLLNIDLSYNDLSGSFPSWINQPNLQLNLVANNFTIDSSSNSGLPSGLDCLQRNFPCNRGRGIYSDFGIKCGGPQIRGSSGILFERENETLGPATYFVTGTKRWAVSNAGYFTGSNNPRYQGNTLSQFPNTIDTELFQTQRLSASSLRYYGLGLENGNYTVNLQFAEIAIPNSNTWQSRGRRVFDIYIQGNRVLQNFDIRREAGGSFLAVEKKFTAQVTENFLEIHLFWAGKGTCCIPEQGTYGPSVSAISATPDFVPTVSNVPPSTKENRTGLIVGLVVGLGSVFFLIIGAVFIIVQRRKRRRAYEDEELLGIDARPYTFSFSELRGATEDFNSSNKLGEGGFGPVYKGTLSDGRVVAVKQLSVASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQALFEKRHLILDWPTRFDICVGVARGLTYLHEESRLRIVHRDVKASNILLDGDLTPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALELVSGRPNSDPSLEQDKVYLLEWAWYLHENNQELEMVDFELSEFSEEEVKRVIGVALLCTQTSPGLRPSMSRVVAMLTGDIEVATVTSKPGYLTDWKFDDITSFIDNPSTEEPDTGRYASTSSSIVDTKHSPTNVSEPMLRGLLGEGR 1035
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 268672 279557 + MC04g0033 Mch4g0037 684749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0037 1035 Pfam Protein tyrosine and serine/threonine kinase 699 963 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0037 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0037 1035 FunFam Os05g0263100 protein 42 281 - -
Mch4g0037 1035 MobiDBLite consensus disorder prediction 994 1035 - -
Mch4g0037 1035 Pfam Malectin domain 431 613 IPR021720 -
Mch4g0037 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 990 IPR051824 GO:0005886(PANTHER)
Mch4g0037 1035 SUPERFAMILY L domain-like 100 400 - -
Mch4g0037 1035 FunFam Leucine-rich repeat receptor-like protein kinase 427 617 - -
Mch4g0037 1035 FunFam Putative LRR receptor-like serine/threonine-protein kinase 282 405 - -
Mch4g0037 1035 Gene3D Ribonuclease Inhibitor 204 271 IPR032675 -
Mch4g0037 1035 FunFam Putative LRR receptor-like serine/threonine-protein kinase 772 976 - -
Mch4g0037 1035 SUPERFAMILY Protein kinase-like (PK-like) 680 997 IPR011009 -
Mch4g0037 1035 Gene3D Ribonuclease Inhibitor 272 423 IPR032675 -
Mch4g0037 1035 ProSiteProfiles Protein kinase domain profile. 696 970 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0037 1035 CDD STKc_IRAK 702 966 - -
Mch4g0037 1035 Pfam Leucine Rich Repeat 222 244 IPR001611 GO:0005515(InterPro)
Mch4g0037 1035 Pfam Leucine Rich Repeat 318 340 IPR001611 GO:0005515(InterPro)
Mch4g0037 1035 Pfam Leucine Rich Repeat 294 314 IPR001611 GO:0005515(InterPro)
Mch4g0037 1035 Pfam Leucine Rich Repeat 246 268 IPR001611 GO:0005515(InterPro)
Mch4g0037 1035 MobiDBLite consensus disorder prediction 994 1022 - -
Mch4g0037 1035 Gene3D Transferase(Phosphotransferase) domain 1 772 975 - -
Mch4g0037 1035 Gene3D Phosphorylase Kinase; domain 1 657 771 - -
Mch4g0037 1035 Gene3D - 430 617 - -
Mch4g0037 1035 Gene3D Ribonuclease Inhibitor 59 203 IPR032675 -
Mch4g0037 1035 FunFam Leucine-rich repeat receptor-like protein kinase 665 771 - -
Mch4g0037 1035 SMART serkin_6 696 964 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0037 Mch-Chr4:268672 Mch4g0077 Mch-Chr4:524273 8.88E-165 dispersed
Mch6g0470 Mch-Chr6:3119654 Mch4g0037 Mch-Chr4:268672 8.31E-71 transposed
Mch10g1002 Mch-Chr10:7153818 Mch4g0037 Mch-Chr4:268672 5.74E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77299 PF07714 PK_Tyr_Ser-Thr 2.40E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0037 - - - 0.0