Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch4g0045 | ATGGCGACGGAGGTGAATATGGGCGGGAGCTGCAAAAAGAGTGCCCCATCCCCATGCGCCGCGTGCAAGCTTCTGCGGCGGCGGTGCTCTCAGGACTGCGTATTTGGCCCTTATTTCCCAGCCGACCAGCCCCACAAATTCTCCTGCGTCCATAAAGTCTTTGGAGCTAGTAATGTCAGCAAGTTGTTGCAGGAAGTGGCAGAGGAGCAGCGGAGCGACGCGGTGAGTTCGATTGTGTACGAAGCGAAGGCGAGAATAAAAGACCCGGTTTACGGGTGCGTGGGAACAATATCGAGCCTACAGCGGCAAGTGGAGGCACTCCAAGAGCAACTGGCCATCACCCAGGCCCAGCTGCTCCACTTGAAAATGGCCCAATGCCCCACT | 384 | 57.29 | MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSIVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQAQLLHLKMAQCPT | 128 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 317030 | 318936 | - | MC04g0039 | Mch4g0045 | 684757 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch4g0045 | 128 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 17 | 124 | - | - | |
Mch4g0045 | 128 | Coils | Coil | 97 | 124 | - | - | |
Mch4g0045 | 128 | ProSiteProfiles | LOB domain profile. | 17 | 118 | IPR004883 | - | |
Mch4g0045 | 128 | Pfam | Lateral organ boundaries (LOB) domain | 18 | 115 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch2g0516 | Mch-Chr2:3674653 | Mch4g0045 | Mch-Chr4:317030 | 5.85E-23 | dispersed | |
Mch2g0815 | Mch-Chr2:5603779 | Mch4g0045 | Mch-Chr4:317030 | 4.11E-50 | dispersed | |
Mch4g0045 | Mch-Chr4:317030 | Mch9g1433 | Mch-Chr9:16724604 | 4.19E-52 | dispersed | |
Mch2g0739 | Mch-Chr2:5062145 | Mch4g0045 | Mch-Chr4:317030 | 7.43E-59 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43108 | PF03195 | LOB | 6.40E-43 | No_clan | Mch | TF |
Pathway information
