Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0126 ATTCTTGAAGGGGGTGATTTTGAAGATGGAGGTAGTTTTGCAAATGTTAAAGAATTTTCCACTGAGAAAGGGCTCCAATTGTTCACCTTCAAGCAGCTACACTCAGCAACCGGTGGTTTTAGCAAGTCAAATGTAGTCGGGCACGGTAGCTTCGGTCATGTATATCGAGGAGTCCTCAATGATGGGAGGAAGGTTGCAATTAAGCTTATGGATCAAGGGGGGAAGCAGGGAGAGGACGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGGCTTCATTCGCCATATTTGTTGGCATTGCTTGGGTATTGCTCAGATCACAATCACAAATTGCTGGTATATGAATTCATGGCAAATGGCGGTCTTCAAGAACATCTATACCCTGTTAGCAGTTCACATTCTGTTAGCGTTAAGTTGGACTGGGAAACAAGGCTGAGAGTTGCTCTTGAAGCTGCCAAAGGTTTGGAGTATTTACACGAACACGTAAGTCCCCCAGTAATTCATAGGGATTTCAAGAGCAGCAATGTCCTGTTGGACAAAAGCCTCCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGATTGGCTCAGATAAAGCCGGGGGGCATGTCTCCACTCGAGTCCTGGGGACACAGGGATACGTCGCCCCTGAGTATGCGCTAACAGGGCATTTAACAACCAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTTACAGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCATTGTTTCTTGGGCTTTGCCAAGGCTGACCGATAGGGAGAAGGTGATGGATATAATGGATCCTTCACTGGAGGGTCAGTACTCCATGAAGGATGTGGTTCAAGTAGCAGCAATTGCAGCCATGTGTGTTCAACCGGAGGCGGACTACAGGCCGCTGATGGCTGATGTTGTCCAATCACTGGTTCCACTGGTGAAAAATTTTAGGACAACTTCAAAGATCGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCACCTACACCACACGACAATGCCAGTTCAGGAGACTGA 1056 46.88 ILEGGDFEDGGSFANVKEFSTEKGLQLFTFKQLHSATGGFSKSNVVGHGSFGHVYRGVLNDGRKVAIKLMDQGGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDHNHKLLVYEFMANGGLQEHLYPVSSSHSVSVKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVLLDKSLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASIVSWALPRLTDREKVMDIMDPSLEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKNFRTTSKIGSSSSSSATKSPTPHDNASSGD 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 830538 832762 + MC04g0112 Mch4g0126 684838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0126 351 FunFam Serine/threonine-protein kinase PBS1 8 115 - -
Mch4g0126 351 SUPERFAMILY Protein kinase-like (PK-like) 18 316 IPR011009 -
Mch4g0126 351 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524(InterPro)
Mch4g0126 351 Gene3D Transferase(Phosphotransferase) domain 1 116 337 - -
Mch4g0126 351 PANTHER OS01G0750732 PROTEIN 23 342 IPR050885 -
Mch4g0126 351 MobiDBLite consensus disorder prediction 327 351 - -
Mch4g0126 351 Gene3D Phosphorylase Kinase; domain 1 10 115 - -
Mch4g0126 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0126 351 FunFam Receptor-like serine/threonine-protein kinase ALE2 116 336 - -
Mch4g0126 351 CDD STKc_IRAK 46 319 - -
Mch4g0126 351 ProSiteProfiles Protein kinase domain profile. 40 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0126 351 Pfam Protein tyrosine and serine/threonine kinase 43 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0126 Mch-Chr4:830538 Mch8g2131 Mch-Chr8:24431334 4.05E-100 dispersed
Mch11g1591 Mch-Chr11:14119731 Mch4g0126 Mch-Chr4:830538 3.48E-67 transposed
Mch5g0932 Mch-Chr5:6895834 Mch4g0126 Mch-Chr4:830538 5.65E-74 transposed
Mch6g2077 Mch-Chr6:23048029 Mch4g0126 Mch-Chr4:830538 5.99E-141 transposed
Mch8g0907 Mch-Chr8:6493546 Mch4g0126 Mch-Chr4:830538 3.20E-35 transposed
Mch1g1898 Mch-Chr1:18923657 Mch4g0126 Mch-Chr4:830538 3.02E-39 wgd
Mch10g1082 Mch-Chr10:7953754 Mch4g0126 Mch-Chr4:830538 1.36E-60 wgd
Mch3g1071 Mch-Chr3:14226827 Mch4g0126 Mch-Chr4:830538 6.39E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77303 PF07714 PK_Tyr_Ser-Thr 2.20E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0126 - - - 0.0