Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0127 ATGGCTTCAATTTCTCATCTCTTCATAGTTCTCTCCCTCTTAACCTTCTCGGCCAATGCCCAGCTCTCCCCCACCTTCTACTCGAAAACCTGTCCAAACCTCCAACGGATCGTTCGTTCGGGTATGACCAAAGCTATTAACAAAGAACCTCGCATGGGGGCTTCCATCCTTCGCTTGTTCTTCCACGATTGCTTCGTAAATGGCTGTGATGGTTCTATACTGCTGGATGCCTCTTCAAGCTTTACCAGCGAAAAGAATGCGTTTCCCAACAGAGACTCGGCCAGAGGCTTCGAAGTGATTGACGACATTAAAACTAGTGTCGAAGCTGCTTGCAAAGGTGTCGTTTCATGCGCTGATATCCTTGCTCTTGCCACTCGCGAAGGGGTCAATTTGCTTGGAGGGCCTAGTTGGACACTACCGCTTGGTCGGAAGGACTCGAGGACCGCGAGCGAGAGTGGAGCAAACAACAACCTACCAGGGCCAGGCTCGGACCTATCGACGCTGATCTCGATGTTCAGCGCGCAGGGGCTAAACGCCCGTGAGATGACCGCGCTCTCGGGCGCCCACACCATCGGCATGGCCAATTGTGCCTTCTTCCGAACCCGCATCTACAACGAGTCGAACATCGACCCCACATTCGCCGCCCAGCGGAGAGCCAACTGCCCGTTCACCGGCGGCGACACCAACTTGGCCCCACTCGACGGAACGCCCAATAAGTTCGACAACACGTATTACCGGGACTTGATTAATAAGCGTGGCCTGTTCCATTCCGACCAGCAGCTCTTCAACGGCGGTTCTCAAGACCCGCTGGTTCGGACTTACAGCACAAGCCCGGCCATCTTCACGAGGGACTTTTCGAATGCGATGATAAAGATGGGGAATCTCGGCCCGCCGGCTGGGGCGCCAACTGAGATCAGATTAAATTGCAGGGTAGTTAAT 939 54.31 MASISHLFIVLSLLTFSANAQLSPTFYSKTCPNLQRIVRSGMTKAINKEPRMGASILRLFFHDCFVNGCDGSILLDASSSFTSEKNAFPNRDSARGFEVIDDIKTSVEAACKGVVSCADILALATREGVNLLGGPSWTLPLGRKDSRTASESGANNNLPGPGSDLSTLISMFSAQGLNAREMTALSGAHTIGMANCAFFRTRIYNESNIDPTFAAQRRANCPFTGGDTNLAPLDGTPNKFDNTYYRDLINKRGLFHSDQQLFNGGSQDPLVRTYSTSPAIFTRDFSNAMIKMGNLGPPAGAPTEIRLNCRVVN 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 841842 844104 + MC04g0113 Mch4g0127 684839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0127 313 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601(InterPro)
Mch4g0127 313 PANTHER PEROXIDASE 72-RELATED 11 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 MobiDBLite consensus disorder prediction 142 162 - -
Mch4g0127 313 FunFam Peroxidase 159 292 - -
Mch4g0127 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Mch4g0127 313 Gene3D - 25 310 - -
Mch4g0127 313 ProSiteProfiles Plant heme peroxidase family profile. 21 313 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 FunFam Peroxidase 25 164 - -
Mch4g0127 313 SUPERFAMILY Heme-dependent peroxidases 21 313 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 Pfam Peroxidase 38 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0127 313 Gene3D Peroxidase, domain 2 159 292 - -
Mch4g0127 313 MobiDBLite consensus disorder prediction 143 162 - -
Mch4g0127 313 CDD secretory_peroxidase 21 312 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0802 Mch-Chr2:5520136 Mch4g0127 Mch-Chr4:841842 9.87E-120 dispersed
Mch4g0127 Mch-Chr4:841842 Mch4g2473 Mch-Chr4:25560499 7.78E-128 dispersed
Mch3g1101 Mch-Chr3:14427638 Mch4g0127 Mch-Chr4:841842 5.85E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0127 K00430 - csv:101208932 490.345