Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0139 ATGATGAAGCGTTATGTTTACATCAACGATGATGAATCATCAAATGATCTTTACCGTGATAACCGCATTTCAAATCGAAAATACACATTATTGAACTTTCTCCCCAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAATCAATACTTTTTGTTGATTGCTTGCCTACAGTTATGGCCGCTCATAACTCCAGTAAACCCCGCAAGTACATGGGGTCCTCTTATCTTCATTTTTGCAGTGTCTGCAACAAAAGAGGCATGGGATGATTACAATAGATATTTGTCAGACAAGAAAGCAAATGAGAAAGAAGTTTGGGTTGTGAGGCAGGGTACCAGAAAAATTATTCAAGCACAAGATATTCATGTTGGTAATTTAGTATGGCTCAGGGAGAACGATGAAGTGCCTTGTGATCTTGTTTTGATTGGTACCTCCGATCCTCAAGGAATTTGCTATATAGAGACATCTGCCCTGGATGGGGAAACTGACTTGAAGACAAGGGTCATACCCTCAGCTTGCATGGGAATAGATTTTGATCTACTAAACAAGATCAAGGGTGTTATAGAGTGTCCAAGACCAGATAGGGATATTAGAAGATTTGATGCAAATGTTCGGTTATTTCCTCCTTTTATTGACAATGACGTGTGCCCTTTGACAATAAAAAACACAATTCTTCAGTCATGTTACTTGCGGAACACAGAGTGGGTCTGTGGAGTAGCCGTCTACACAGGCAAGAATGAAACCAAGCTTGGAATGAGCAGGGGTGTCCCAGAACCAAAACTTACAGCTATGGATGCAATGATTGACAAGTTAACTGGTGCTATATTTGTTTTTCAAATTGTAGTGGTTGTTGTTCTAGGTATTGCTGGTAATGTGTGGAAGGATTCTGAAGCCAGAAAGCTATGGTATGTGCAACATCCAGATGAAGGTCCGTGGTATGAGCTACTGGTCATCCCTCTTCGGTTTGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTGTCTCTGGATCTTGTAAAGAGCTTATATGCAAAATTTATTGATTGGGACTATGAGATGATTGACCGTGAGACTGCCATTCCTTCCCATGCCACGAATACAGCAATAAGTGAGGATCTGGGACAAGTTGAATACATCTTGACAGATAAAACTGGTACCCTCACTGAAAATAAGATGATCTTCAGAAGATGCTGTATTAGTGGTATTTTTTATGGAAATGAAAGTGGAGATGCCTTGAAAGATACAAAGTTGCTCAATGCTGTTGCAAGCAGCTCTCCAGATGTTATACGATTCCTCACAATTATGGCAATATGTAATACAGTGGTGCCTACAAGAAGTAAATGTGGAAATATCTTGTACAAGGCACAGTCACAGGATGAGGATGCTCTTGTGAATGCGGCTGCTTATTTGCATATGGTATTTGTCAATAAGAATGCTAATATTCTTGAAGTTCAATTTAACGGATTGCTACTTAGGTATGAGCTCCTGGATACTCTGGAGTTTACTTCTGAACGAAAAAGAATGTCTGTAGTTGTTAAAGATTGTCAGAATGGAAAGATTGTCCTCCTGTCTAAAGGAGCTGATGAAGCTATACTTCCTTATGCTTATGCTGGCCAGCAAACAAGAACATTTATTGAAGCCGTGGATCAATATGCACAACTGGGGCTCCGCACATTATGTATGGCTTGGCGTGAACTAGAGGAAGATGAGTATCGAGAATGGGCTTTTATGTTTAAGGAGGCTAATAGCTTATTGGTTGACAGGGAGTGGAGGCTAGCTGAAGTTTGCCAAAGGTTAGAGCGCAATTTGGAAATCCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGAGTCCCAGAAACAATTGAAACATTGAGAAGAGCAGGAATAAATTTTTGGATGCTGACAGGAGACAAGCAGAATACTGCCATTCAGATAGCTCTTCTATGCAACTTTATTTCACCAGAGCCCAAAGGACAATTACTGTTAATTGATGGAAAAACGGAGGATGAAGTTTGCAGAAGTTTGGAGAGAGTTGTTCTAACTATGAAGACAACAACTTCAGAACCCAAGGATGTTGCTTTTGTCGTTGATGGCTGGGCTCTTGAAATTGCTCTAAAGAATTATCGAAGGGCTTTCACTGAGTTGGCAATATTATCAAGAACTGCAATATGTTGTCGTGTGACGCCATCACAGAAGGCTCAGCTTGTGGAACTCTTAAAATCCTGTGACTATAGAACACTGGCAATTGGCGATGGTGGGAATGATGTGAGGATGATACAACAAGCTGACATTGGTGTTGGCATTAGTGGAAGAGAAGGACTGCAGGCAGCTAGGGCAGCTGATTATAGTATTGGAAAGTTCAGGTTTCTGAAGAGATTGATTCTAGTTCATGGACGATACTCATATAACCGTACAGCATTTTTGTCACAATATTCATTCTATAAATCTTTATTGATATGTTTTATCCAAATCTCTTTCTCTTTCATTTCAGGTGTATCTGGGACCAGTCTCTTTAATTCTGTTAGCTTGATGGCTTACAATGTTTTCTACACCAGCATTCCTGTTTTGGTTAGCGTCCTTGACAAAGATCTCAGTGAAGAAACAGTGATGCAACATCCCCAGATTTTATTTTACTGCCAAGCTGGGAGGCTTTTAAATCCCAGCACATTTGCTGGATGGTTTGGTCGATCTCTATTTCATGCTGTTGTCGTGTTTGTAATTAGCATACATGCCTATGCTAATGAAAAGAGCGAAATGGTGGAGGTTTCAATGGTGGCACTCTCTGGGTGCATCTGGTTACAAGCTTTTGTAGTGACTTTAGAGACCAATTCATTTACGATGCTGCAACATATTGCCATATGGGGGAATTTAGCTGCTTTCTATGTCATCAATTGGATCTTCAGTGGCATTCCTTCATCTGGGATGTATACTATAATGTTTCGATTATGTAGACAACCATCATATTGGATAACCATATTTTTGATAATAGGCGTGGGAATGGGCCCACTTCTGGCTATCAAGTACTTCAGATATACATACAGACCAAGCAAAATCAACACTCTTCAGCAGGCTGAACGATTGGGTGGGCCGATCATGTCGCTCAAAAACATCGAGCCTCAGCCTCGGCCCATTGAGAAAGAAGTTTCCCCGCTCTCAATAACTCAGCCCAAAAACAGAAACACAGTTTACGAGCCTCTACTTTCAGAGTCTCCAAGCGCCACTAGAAGGTCAGGAGCCTCATTTGATTTCTTTCAGATGCAGCCTAGTTATTCAAGAAATTGCAAGGATAACTGA 3303 40.69 MMKRYVYINDDESSNDLYRDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGTRKIIQAQDIHVGNLVWLRENDEVPCDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLNKIKGVIECPRPDRDIRRFDANVRLFPPFIDNDVCPLTIKNTILQSCYLRNTEWVCGVAVYTGKNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQIVVVVVLGIAGNVWKDSEARKLWYVQHPDEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDRETAIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNESGDALKDTKLLNAVASSSPDVIRFLTIMAICNTVVPTRSKCGNILYKAQSQDEDALVNAAAYLHMVFVNKNANILEVQFNGLLLRYELLDTLEFTSERKRMSVVVKDCQNGKIVLLSKGADEAILPYAYAGQQTRTFIEAVDQYAQLGLRTLCMAWRELEEDEYREWAFMFKEANSLLVDREWRLAEVCQRLERNLEILGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTMLQHIAIWGNLAAFYVINWIFSGIPSSGMYTIMFRLCRQPSYWITIFLIIGVGMGPLLAIKYFRYTYRPSKINTLQQAERLGGPIMSLKNIEPQPRPIEKEVSPLSITQPKNRNTVYEPLLSESPSATRRSGASFDFFQMQPSYSRNCKDN 1100
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 921730 932091 + MC04g0124 Mch4g0139 684851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0139 1100 Pfam haloacid dehalogenase-like hydrolase 596 766 - -
Mch4g0139 1100 Pfam Phospholipid-translocating P-type ATPase C-terminal 780 1019 IPR032630 -
Mch4g0139 1100 Pfam Cation transport ATPase (P-type) 437 534 - -
Mch4g0139 1100 PRINTS P-type cation-transporting ATPase superfamily signature 153 167 - -
Mch4g0139 1100 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Mch4g0139 1100 PRINTS P-type cation-transporting ATPase superfamily signature 630 640 - -
Mch4g0139 1100 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Mch4g0139 1100 FunFam Phospholipid-transporting ATPase 451 594 - -
Mch4g0139 1100 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 575 IPR023299 GO:0000166(InterPro)
Mch4g0139 1100 FunFam Phospholipid-transporting ATPase 76 253 - -
Mch4g0139 1100 Pfam Phospholipid-translocating ATPase N-terminal 6 71 IPR032631 -
Mch4g0139 1100 Pfam E1-E2 ATPase 100 297 - -
Mch4g0139 1100 NCBIfam phospholipid-translocating P-type ATPase 425 1025 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Mch4g0139 1100 FunFam Phospholipid-transporting ATPase 604 791 - -
Mch4g0139 1100 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Mch4g0139 1100 Gene3D - 76 253 - -
Mch4g0139 1100 Gene3D - 451 580 IPR023299 GO:0000166(InterPro)
Mch4g0139 1100 Gene3D - 604 792 IPR023214 -
Mch4g0139 1100 SFLD Haloacid Dehalogenase 364 803 - -
Mch4g0139 1100 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 1018 IPR023298 -
Mch4g0139 1100 NCBIfam HAD-IC family P-type ATPase 719 836 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch4g0139 1100 SUPERFAMILY HAD-like 376 807 IPR036412 -
Mch4g0139 1100 SUPERFAMILY Calcium ATPase, transduction domain A 101 245 IPR008250 -
Mch4g0139 1100 SFLD p-type atpase 364 803 IPR044492 -
Mch4g0139 1100 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 3 1025 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0139 Mch-Chr4:921730 Mch4g1954 Mch-Chr4:22020178 5.08E-171 dispersed
Mch4g0139 Mch-Chr4:921730 Mch3g1659 Mch-Chr3:18321366 1.92E-165 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0139 K01530 - csv:101210900 2063.11