Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0140 ATGAGCGGTGTTTGTGCTGAGCAGCAGAAATTTCAATTTCAATTTCCTTCTTCTTCTTCTTTGTCGTCGTCTTCGCAATTTCTTTCTCAGAAAATCCCCTTTCTGAAGGACATTAACGTTCCGCCGAGGAAGCTTCTTGCTCGCCTTGAGAACGCTGAGATGTGTTCCGATTCGCCGCGATTTTCGTTCTCTGTTGATTCTCTGTTGCAGAAATTTCTGCCGTTCAACGGCGAGGACGAGGCGGAGGACGACGACGGCGATCCGTATTCGTCCGATCATTTTCGGATGTACGAGTTTAAGGTTCGGCGGTGTACGCGTAGCCGGAGCCATGACTGGACGGACTGTCCGTTTGCGCATCCCGGCGAGAAGGCGCGGCGGCGGGATCCTCGCCGGTTTCATTACTCAGGCACGATGTGCCCGGAGTTTCGCCGCGGCGGTTGCAGCCGTGGGGATGGATGTGAGTTCGCTCACGGAGTTTTTGAGTGCTGGCTTCATCCGGCGAGGTACCGGACTGAGGCGTGTAAAGATGGGAAGAACTGTAAGAGGAAGGTTTGTTTCTTCGCCCATACGCCACGTCAGCTCCGTCTTCTGCCGCCGGTGGGCAATTACCAAGGCAGCGGCTCTTGTTCGCCGCCGAACAAGAAGAGCCCTCTCGGTTCGGCCGCCGGTTCGAATCACTGCTGTATGTTCTGTCATTGCGGCGGAGCCACCTCCTCGCCGACGTCGACGCTTTTCGGAATGTCTCATCTGTCGCCGCCGCACTCTCCGCCGCTCTCCCCGGGAAAGCCCCGGTCACTGAACGGATTTTCCCCAATTTCAAGGTACAATCCTGAGTGTAATTTAAATGGAGTTTTGAGCTATAAAGATGCACTAACCGAGCTCATGAGTTCCTTCGAGTCCATGAATATCGACGACGCTAATGCCACTTTGCCCACCGCCGCCGCCGCCCCCCCAAGGCCGACGATCCCTTGGATCGATGTTGCCTCCCTCAACGCTGAAGATCAACTGCAGTTTATTCTCTCACCTTCCACCCCAAATATCTCCACCGCCGCGTCGGCGACACATTCCGGCGAGAATAGGGGTAACGCCGACAACGGGTGGGGCGGCGCGTCCGGGCCGGATCTGGGATGGGTGAATGAGCTGTTGATG 1149 56.14 MSGVCAEQQKFQFQFPSSSSLSSSSQFLSQKIPFLKDINVPPRKLLARLENAEMCSDSPRFSFSVDSLLQKFLPFNGEDEAEDDDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCSRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHTPRQLRLLPPVGNYQGSGSCSPPNKKSPLGSAAGSNHCCMFCHCGGATSSPTSTLFGMSHLSPPHSPPLSPGKPRSLNGFSPISRYNPECNLNGVLSYKDALTELMSSFESMNIDDANATLPTAAAAPPRPTIPWIDVASLNAEDQLQFILSPSTPNISTAASATHSGENRGNADNGWGGASGPDLGWVNELLM 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 937309 938457 - MC04g0125 Mch4g0140 684852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0140 383 FunFam Zinc finger CCCH domain-containing protein 66 91 159 - -
Mch4g0140 383 ProSiteProfiles Zinc finger C3H1-type profile. 134 160 IPR000571 GO:0046872(InterPro)
Mch4g0140 383 PANTHER UNKEMPT FAMILY MEMBER 38 320 IPR045234 -
Mch4g0140 383 SMART c3hfinal6 168 191 IPR000571 GO:0046872(InterPro)
Mch4g0140 383 SMART c3hfinal6 133 159 IPR000571 GO:0046872(InterPro)
Mch4g0140 383 MobiDBLite consensus disorder prediction 348 371 - -
Mch4g0140 383 Gene3D - 133 196 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0293 Mch-Chr10:1925443 Mch4g0140 Mch-Chr4:937309 1.31E-54 dispersed
Mch4g0140 Mch-Chr4:937309 Mch8g3199 Mch-Chr8:34150729 2.02E-72 dispersed
Mch4g0140 Mch-Chr4:937309 Mch6g0886 Mch-Chr6:6190545 1.63E-69 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43117 PF00642 zf-CCCH 0.00019 CL0537 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0140 K23047 - csv:101211149 537.339