Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0141 ATGACCACCGGAAGAGAAATCCTCCACAAGATGAAGGTGAAGGCAGGATTTTGTTCTTCGGCAGGCGATGCAGCTGGGAAAGGCAAAGCCAAAGCGTCGTCGAAGAATTGTAGCAATATAACTCATGGATGTCACTTGGTGAAGGGCAAAACCAACCACCCCATGGAAGATTATTTGGTCTCCGATTTCAAGCGTGTCAAAGAACACGACCTGGGTTTATTTGCAATTTTCGATGGCCATTTGGGCCACGATGTCGCTAATTTCTTGCAAAACAATCTCTTCGACAATATTCTCAAAGAGGCTGACTTCTGGAGCGAAACAAGAAAAGCCATAAAGAGAGCTTACAAGAAAACGGACGACGAAATATTGGATAAAGTGAAGCAATTGGGAAAAGGGGGATCCACGGCTGTAACTGCCATTTTAATCGACGGTCAAAAACTTGTGGTTGCCAACGTCGGAGATTCTCGAGCTGTTCTGTGCAAAAATGGTGTCGCTGAACAGCTTTCCGTTGATCATGAACCTTCCAAAGAAAAAAGGGAGATTGAGAGCCGCGGTGGTTTCGTATCAAATATTCCAGGAGATGTTCCACGTGTCGATGGGCAATTGGCCGTGGCAAGAGCGTTTGGGGACAAGAGCTTAAAACTCCACCTCAGCTCAGAGCCTGACGTTGAAGTGAAAACGGTGGATGAAACTACAGAGTTCATGATTTTGGCTAGTGATGGCATATGGAAGGTAATGACTAATCGAGAGGCAATGGAATCTATTAGACACATAAAAGACGCTAACTTAGCGGCCAAACGACTCATCGACGAAGCAGTATCTAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCAGTGA 870 45.17 MTTGREILHKMKVKAGFCSSAGDAAGKGKAKASSKNCSNITHGCHLVKGKTNHPMEDYLVSDFKRVKEHDLGLFAIFDGHLGHDVANFLQNNLFDNILKEADFWSETRKAIKRAYKKTDDEILDKVKQLGKGGSTAVTAILIDGQKLVVANVGDSRAVLCKNGVAEQLSVDHEPSKEKREIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDVEVKTVDETTEFMILASDGIWKVMTNREAMESIRHIKDANLAAKRLIDEAVSRKSKDDISCIVVRFQ 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 940150 942287 - MC04g0126 Mch4g0141 684853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0141 289 Gene3D - 35 289 IPR036457 -
Mch4g0141 289 PANTHER PROTEIN PHOSPHATASE 36 286 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch4g0141 289 ProSiteProfiles PPM-type phosphatase domain profile. 41 288 IPR001932 -
Mch4g0141 289 FunFam Probable protein phosphatase 2C 39 31 289 - -
Mch4g0141 289 Pfam Protein phosphatase 2C 52 281 IPR001932 -
Mch4g0141 289 SUPERFAMILY PP2C-like 38 288 IPR036457 -
Mch4g0141 289 SMART PP2C_4 31 286 IPR001932 -
Mch4g0141 289 CDD PP2Cc 42 288 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0664 Mch-Chr11:4336020 Mch4g0141 Mch-Chr4:940150 3.76E-105 dispersed
Mch4g0141 Mch-Chr4:940150 Mch4g1826 Mch-Chr4:21120484 1.36E-57 dispersed
Mch10g0340 Mch-Chr10:2274676 Mch4g0141 Mch-Chr4:940150 3.33E-83 transposed
Mch1g2098 Mch-Chr1:20339398 Mch4g0141 Mch-Chr4:940150 1.46E-86 transposed
Mch7g0941 Mch-Chr7:13841548 Mch4g0141 Mch-Chr4:940150 1.07E-32 transposed
Mch11g1054 Mch-Chr11:7341252 Mch4g0141 Mch-Chr4:940150 1.40E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0141 K17506 - csv:101211399 487.263