Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0145 ATGGCAGATTCGTCACAACATCCATCAGTGTTTCAGAAGATATATGGTCGTTCTTACCTCACTTCTAGGCTTTCCCCTGGCTTTCAGACCAGGAATTACAGTACAACAGGTGTACATGTGAATGGAGGTCTGGTGAGTCCCTTACAGGCGGCTTATTATGGGACTGGCTTTGCTGGAGTTTCACCTACTCATTTTCTTGTACAAGCTCCTTCTGAAAAAGGTGCAGCCGGCTTTGCTGTGGATTTTCTAATGGGAGGAGTATCTGCTGCTGTATCCAAAACGGCTGCTGCTCCAATTGAGCGTGTCAAACTGCTGATTCAAAATCAGGATGAAATGATTAAGGCCGGTAGGCTATCTGAGCCATACAAAGGAATTACTGACTGCTTTGCCCGAACAATTAAAGATGAAGGAGTCATTGCCCTATGGAGGGGGAACACTGCAAACGTTATCAGATACTTCCCCACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGTTGTTCAACTTCAAGAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGGAATTTGGCTTCTGGTGGTGCTGCTGGTGCATCATCTCTTTTATTTGTTTATTCCCTTGATTATGCTCGAACTCGTCTGGCTAATGATGCTAAGGCTGCTAAAAAAGGTGGTGAGAGGCAGTTTAACGGTCTTGTTGATGTTTACAAGAAAACCCTTAAATCTGATGGCATTGCTGGGCTGTATCGTGGATTTAACATCTCTTGTGTTGGAATTATTGTGTATCGTGGTCTATACTTTGGAATGTATGATTCTATGAAGCCTGTGGTTCTGGTTGGCGACTTGCAGGATAGTTTTCTCGCTAGTTTCTTGCTTGGATGGTGTATCACAATAGGAGCTGGTTTGGCCTCTTACCCCATTGATACCGTCCGAAGAAGAATGATGATGACCTCGGGAGAAGCCGTCAAGTACAGTAGCTCCTTGGACGCATTCAAACAAATCATCAAGAATGAGGGTACTAAATCTCTCTTCAAGGGTGCTGGAGCAAACATTTTGCGTGCCGTTGCCGGTGCTGGTGTGCTGGCTGGGTACGATAAGCTCCAGCTCATTGTTCTCGGCAAGAAATACGGTTCCGGTGGTGGCGGTTAA 1140 45.18 MADSSQHPSVFQKIYGRSYLTSRLSPGFQTRNYSTTGVHVNGGLVSPLQAAYYGTGFAGVSPTHFLVQAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGITDCFARTIKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSMKPVVLVGDLQDSFLASFLLGWCITIGAGLASYPIDTVRRRMMMTSGEAVKYSSSLDAFKQIIKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLIVLGKKYGSGGGG 379
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 973378 976714 + MC04g0130 Mch4g0145 684857
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0145 379 Pfam Mitochondrial carrier protein 181 273 IPR018108 -
Mch4g0145 379 Pfam Mitochondrial carrier protein 77 173 IPR018108 -
Mch4g0145 379 Pfam Mitochondrial carrier protein 281 369 IPR018108 -
Mch4g0145 379 PRINTS Mitochondrial carrier protein signature 81 94 IPR002067 GO:0055085(InterPro)
Mch4g0145 379 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085(InterPro)
Mch4g0145 379 PRINTS Mitochondrial carrier protein signature 290 312 IPR002067 GO:0055085(InterPro)
Mch4g0145 379 PRINTS Mitochondrial carrier protein signature 94 108 IPR002067 GO:0055085(InterPro)
Mch4g0145 379 PRINTS Mitochondrial carrier protein signature 246 264 IPR002067 GO:0055085(InterPro)
Mch4g0145 379 PRINTS Mitochondrial carrier protein signature 144 164 IPR002067 GO:0055085(InterPro)
Mch4g0145 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 285 367 IPR018108 -
Mch4g0145 379 FunFam ADP,ATP carrier protein, mitochondrial 79 374 - -
Mch4g0145 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 181 273 IPR018108 -
Mch4g0145 379 SUPERFAMILY Mitochondrial carrier 77 363 IPR023395 -
Mch4g0145 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 76 169 IPR018108 -
Mch4g0145 379 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 73 375 IPR002113 GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Mch4g0145 379 Gene3D Mitochondrial carrier domain 79 374 IPR023395 -
Mch4g0145 379 PRINTS Adenine nucleotide translocator signature 155 167 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Mch4g0145 379 PRINTS Adenine nucleotide translocator signature 122 143 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Mch4g0145 379 PRINTS Adenine nucleotide translocator signature 181 194 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Mch4g0145 379 PRINTS Adenine nucleotide translocator signature 286 302 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Mch4g0145 379 PRINTS Adenine nucleotide translocator signature 78 90 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1675 Mch-Chr3:18401016 Mch4g0145 Mch-Chr4:973378 1.19E-136 dispersed
Mch4g0145 Mch-Chr4:973378 Mch9g0549 Mch-Chr9:4015116 1.09E-206 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0145 K05863 - csv:101212128 640.573