Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0151 TCTTCTCTCTTCTCTGCCGTTATTTTGATTCTCATCTCCATTTCCGTCTCAGTTTCCTCCACAGACTTCGTCTTCAACACCAATTTCACTTCCACTGAAATTTTGCTTTTTGGCAACGCCACAATCGAATCCTCTGTTCTTATTCTCACCAAGAACACCCCCTTCACCATCGGCCGTGCCCTCTACCCTTCTAAAATCCCGATCCGTTTCACCGGTTCTTCTTTTTCCTTCGCCACCTCCTTCATCTTCTCCGTCGTTCCGTACCGGAATCTGCTCCCCGGCCATGGTTTCGCCTTTCTCTTCACACCCTCTACTGGAATCAACGGCACCAGCTCCGCCCAGAATTTGGGGCTTCTCAATTTCACGAATAATGGCAGCCCCAGTAACCATGTCTTCGCTGTTGAGTTCGATTCCTTCCAGAACCAAGAATTCAACGACACCAACGATAACCATGTGGGCGTGGACCTGAATTCTCTCGTGTCTATTGTTTCCTCTGCTGCAGGGTTTTGGGGTGGGGAAGATGAAGATGAATTCACGGGTTTGCAGATTAATAATGGAGATACTTACCAGGTTTGGATTGAATGTTTAAATTCTTTGGTTAATATTACAATGGCTGAAGTGGGGGAGAAAAAACCACGAAGGCCATTAATAACCCACTTTGTGAATTTTTCTGGATTGCTTCTGGATGAAATGTATGTGGGATTTACAGCAGCCACAGGGCAATTAGTTCAAAGTCATAAGATATTATCTTGGAGTTTCAGTACCACTAATTTGTCGATTGCTGATGCTTTATTGACAACTGATTTGCCATATTTTGCTCCTCCCAAAACCTCCATTTTCAATTCAAATGCATTCATTGTGGGGATAACTGTGGGTGGTGGTGGGCTTGTAATTGTCTGCAGCATTGTAATCTATGTTGTAATTATCACAAGGAGGGGACGGAAGAAACTAGAGGAAGAAGAAATTGAAGACTGGGAGTTAGAATATTGGCCTCATCGATTTACTTATGGAGATGTTTGTGAAGCAACTGATGGGTTCGCAGAAGCCAATGTGATTGGTTTTGGGCGCAATGGGAAGGTCTATAAAGGGACATTAGGCAGATCAAAAGTTGCTGTGAAGAGAATCTCTGTTGAAGCTGAGTTTGGAATGAGGGAGTTTGTGGCTGAGATTTCAAGCTTAGGAAGATTAAAACACAGAAATCTAGTAAAGCTTATAGGATGGTGTAAGAAAGAAAAAGGAAGCTTAATCTTAATGTATGACTATATGGAAAATGGAAGTTTAGACAAGAAACTATTCGAGTGCGAAGAAGAGAATGCAATTCTGAGTTGGGAGAAGAGGATGAAGATTTTAAAAGATGTAGCCGCAGGGCTGTTATATCTGCACCAAGGCTGGGATTACAAGGTTCTACATAGAGACATAAAGACAAACAACGTGTTACTCGACAAGGACATGAATGCTCGATTGGCAGACTTCGGGTTGGCTCGAATACACCCCCACGAGCACAAGGCGGACACAACTCAAGTGGTGGGAACCGTCGGGTACATGGCACCAGAGGTGGTTCGAACAGGGCGAGTATCGACACAAGCCGACGTATTTGGGTTCGGGGTGTTGGTTTTAGAGGTGGTATGTGGGAGGAGAGCAACAGAAGAAGGGAAGCCATGGCTGATAGATTGGGTAAGAGGGGTAATGGAGAAAGGGGAGCTTACAACTGCAGTTGATGAGAGATTGAAAGGTGAGAATGGTGGGAATGTGAAGATTGATGAAGTGGAGAAAATGGTTTGTTTGGGATTATTATGTGCACATCCTGAGGCTGGGGCAAGGCCAACTATGCACCAAATTGTAAACATTTTGGATGACAGAAAGGGAACGGAAAGTGGTTCAAATGATGGATTGTTAAACAGATTAAGAACAACAAGGCTATTGTCTGAGATTTACCAAGGCAATAATTTTCAGCAGCATCCAACGTTTGAAGAAATCAAAAATTATTCCTCTTCAACATCACTTCCAGAATCAGATATTTTAAAGAGTGGCCGC 2034 43.51 SSLFSAVILILISISVSVSSTDFVFNTNFTSTEILLFGNATIESSVLILTKNTPFTIGRALYPSKIPIRFTGSSFSFATSFIFSVVPYRNLLPGHGFAFLFTPSTGINGTSSAQNLGLLNFTNNGSPSNHVFAVEFDSFQNQEFNDTNDNHVGVDLNSLVSIVSSAAGFWGGEDEDEFTGLQINNGDTYQVWIECLNSLVNITMAEVGEKKPRRPLITHFVNFSGLLLDEMYVGFTAATGQLVQSHKILSWSFSTTNLSIADALLTTDLPYFAPPKTSIFNSNAFIVGITVGGGGLVIVCSIVIYVVIITRRGRKKLEEEEIEDWELEYWPHRFTYGDVCEATDGFAEANVIGFGRNGKVYKGTLGRSKVAVKRISVEAEFGMREFVAEISSLGRLKHRNLVKLIGWCKKEKGSLILMYDYMENGSLDKKLFECEEENAILSWEKRMKILKDVAAGLLYLHQGWDYKVLHRDIKTNNVLLDKDMNARLADFGLARIHPHEHKADTTQVVGTVGYMAPEVVRTGRVSTQADVFGFGVLVLEVVCGRRATEEGKPWLIDWVRGVMEKGELTTAVDERLKGENGGNVKIDEVEKMVCLGLLCAHPEAGARPTMHQIVNILDDRKGTESGSNDGLLNRLRTTRLLSEIYQGNNFQQHPTFEEIKNYSSSTSLPESDILKSGR 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1032141 1034174 - MC04g0135 Mch4g0151 684863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0151 678 Gene3D - 19 263 - -
Mch4g0151 678 SUPERFAMILY Protein kinase-like (PK-like) 324 617 IPR011009 -
Mch4g0151 678 CDD STKc_IRAK 352 618 - -
Mch4g0151 678 Gene3D Phosphorylase Kinase; domain 1 308 421 - -
Mch4g0151 678 CDD lectin_legume_LecRK_Arcelin_ConA 21 256 IPR001220 GO:0030246(InterPro)
Mch4g0151 678 SMART serkin_6 346 614 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0151 678 FunFam L-type lectin-domain containing receptor kinase S.4 422 629 - -
Mch4g0151 678 PANTHER - 23 620 IPR050528 GO:0005886(PANTHER)
Mch4g0151 678 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 306 421 - -
Mch4g0151 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 260 IPR013320 -
Mch4g0151 678 ProSiteProfiles Protein kinase domain profile. 346 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0151 678 ProSitePatterns Protein kinases ATP-binding region signature. 352 373 IPR017441 GO:0005524(InterPro)
Mch4g0151 678 Pfam Legume lectin domain 22 258 IPR001220 GO:0030246(InterPro)
Mch4g0151 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0151 678 Gene3D Transferase(Phosphotransferase) domain 1 422 628 - -
Mch4g0151 678 FunFam L-type lectin-domain containing receptor kinase V.9 19 263 - -
Mch4g0151 678 Pfam Protein kinase domain 348 553 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0151 Mch-Chr4:1032141 Mch5g1860 Mch-Chr5:18765416 1.81E-147 dispersed
Mch10g1037 Mch-Chr10:7533418 Mch4g0151 Mch-Chr4:1032141 1.99E-63 wgd
Mch3g1127 Mch-Chr3:14612830 Mch4g0151 Mch-Chr4:1032141 2.69E-250 wgd
Mch3g1048 Mch-Chr3:14079822 Mch4g0151 Mch-Chr4:1032141 6.68E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77306 PF00069 Pkinase 5.60E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0151 - - - 0.0