Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0154 ATGGAGGAGTCTCTGCTGGGTGGAGAAAGTAGCAGTAGCTCCAGCTCTCGGCGTCAGATTCACCATTTGAGATTCAGGCGCCGTTCCGACGCCATCGCTTATGGCTCTGCATATCAAAGAGCAGCTGCTCTCGTGGATCTGGCTGAAGATGGTGTTGGTATACCTGAGAAAATCCTTGATCAGTCAAACTTTCAGAATGCAGCAAGGCTCTACTTCATTTTTATTAAATTTGATCTTATTTGGTCCTTAAATTTCTTTGCGCTGGTTGTCATAAATTTCTTGGAGAAACCCTTATGGTGCTCCAAATACAAGACTCATTCTTGTAATGATAGGGAGTATTTCTTTCTTGGGCAGTTGCCGTACTTAACAGCTGCCGAATCTCTTATATTTGAGGTTGTGACTCTCATAGTACTCATGATACACACATTTTTCCCGATTTCGTATGAAGGTCTCCAGCTTTATTGGAAAAATCCCTTGAACAAGTTGAAGGTCATTTGCACAATAATTTTGGTTGCCGATTTACTCATTTATACTCTATATTTGTCCCCGGTGGCCTTTGATTATCTTCCATTCAGAGTTGCACCATATATTCGAGTTGTCTTTTTCATCATGAATATTAGGCATCTACGGGAGAGCATCATCATCCTGGCCGGGATGCTTGGCACATACTTGAATGTCTTGGCTCTAGGGTTTTTGTTTCTTCTGTTTTCCAGCTGGTTGGCGTATGTTATTTTTGAGGATACACAGCAAGGAAAAATAGTATTTACTTCTTTTGGAACCACATTATATCAAATGTTTATTCTGTTCACCACATCCAACAGTCCAGATGTTTGGATACCTGCCTACAAGGCATCGCGTTGGTATTGCCTGTTTTTTGTTCTTTACGTGCTGTTGGGAGTTTACTTCGTTACAAACTTAATTCTTGCTGTTGTGTACGATAGCTTTAAAAGTCAGCTTGCTAAACAAATTTCTGAGATGGATCGCTCGAGGAAAAGTACATTGGCCAAAGCATTTAATCTTATGGATATTAATAACGTGGGGTATATCAATAAAGACCAGTGCCTTACACTTCTTGAAGAACTTAACAGATACAGAACTTTGCCAAAAATATCAAGGGATGATTATGAGTTAATATTTGATGAGCTGGATGATAGTCATGATTTTAAGATAAATATCAATGAGTTTGATGACCTCTGCAATGCTATAGCTTTGAAGTTCCAGAAAGAGGACATTCCTTCTTGGTTTGAAGGGTATCCCTGGATCTACCATTCATCTTTATCAGAAAAGTTGAAAACATTTGTGCGAAGCCCCACATTTGGATATGTTGTATCCTTCATCCTCATACTGAACCTGGTTGCTGTTATTATTGAAACAACACTCGATATTGAAAATAATGTTGGTCAGAAAGCATGGCAAGAACTCGAGTTTGTATTTGGTTGGTTATATGTAGTTGAAATGGCTCTAAAAATCTATTCCTTTGGATTTTTTAATTATTGGAGAGATGGCCAAAATCAGTTTGATTTCCTGATCACCTGGATTATAGTGATTGGAGAAACTCTAACTTTTGTGGCACCCAGTGGGCTAACTTTTCTTTCAAATGGAGAATGGATTCGCTACCTTCTGATAGCAAGAATGTTACGTCTGATAAGGCTCTTAATGCATGTCCAGCAATATCGAGCATTTCTTGCAACCTTCTTAACCCTCATCCCTAGTTTGATGCCATATCTAGGAACCATTTTCTGCGTTCTCTGTCTTTATTGCACTCTTGGTGTGCAGGTCTTTGGAGGACTTGTTAATGCTGGAAATGCCACTTTGTATGAGACTGATCTGGATGATAATGATTACCTACTTTTTAATTTCAACGACTATCCTAATGGGATGGTGACACTCTTCAATTTACTAGTTATGGGAAACTGGCAAGCATGGATGCAGAGCTACAAGGAGTTGACAGGAAGCATTTGGACCCTCGTTTATTTTATCAGTTTCTACCTAATAACCGTTTTGCTGCTCTTGAATTTGGTGGTAGCTTTTGTCTTGGAAGCATTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGCGAAGAACAGGATCAGGATGGAGATAATAGAAAGGATCGTCGACGTTTTGTTGGCACTAAAACTCGGAGCCGCAAAGTTGACATTCTTCTCCATCATATGTTGAGTGCAGAATTGGATAAAAAGGATTCTGGATCCTCATAG 2223 39.32 MEESLLGGESSSSSSSRRQIHHLRFRRRSDAIAYGSAYQRAAALVDLAEDGVGIPEKILDQSNFQNAARLYFIFIKFDLIWSLNFFALVVINFLEKPLWCSKYKTHSCNDREYFFLGQLPYLTAAESLIFEVVTLIVLMIHTFFPISYEGLQLYWKNPLNKLKVICTIILVADLLIYTLYLSPVAFDYLPFRVAPYIRVVFFIMNIRHLRESIIILAGMLGTYLNVLALGFLFLLFSSWLAYVIFEDTQQGKIVFTSFGTTLYQMFILFTTSNSPDVWIPAYKASRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLAKQISEMDRSRKSTLAKAFNLMDINNVGYINKDQCLTLLEELNRYRTLPKISRDDYELIFDELDDSHDFKININEFDDLCNAIALKFQKEDIPSWFEGYPWIYHSSLSEKLKTFVRSPTFGYVVSFILILNLVAVIIETTLDIENNVGQKAWQELEFVFGWLYVVEMALKIYSFGFFNYWRDGQNQFDFLITWIIVIGETLTFVAPSGLTFLSNGEWIRYLLIARMLRLIRLLMHVQQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVFGGLVNAGNATLYETDLDDNDYLLFNFNDYPNGMVTLFNLLVMGNWQAWMQSYKELTGSIWTLVYFISFYLITVLLLLNLVVAFVLEAFFAELDIESSENGEEQDQDGDNRKDRRRFVGTKTRSRKVDILLHHMLSAELDKKDSGSS 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1040260 1063918 - MC04g0138 Mch4g0154 684866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0154 740 Gene3D - 316 399 - -
Mch4g0154 740 Gene3D - 562 721 - -
Mch4g0154 740 Gene3D - 208 315 - -
Mch4g0154 740 Gene3D - 428 561 IPR027359 -
Mch4g0154 740 MobiDBLite consensus disorder prediction 697 712 - -
Mch4g0154 740 SUPERFAMILY Voltage-gated potassium channels 436 682 - -
Mch4g0154 740 FunFam Two pore calcium channel protein 1 562 719 - -
Mch4g0154 740 Pfam Ion transport protein 127 318 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch4g0154 740 Pfam Ion transport protein 437 682 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch4g0154 740 FunFam Two pore calcium channel protein 1 429 561 - -
Mch4g0154 740 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 736 IPR044581 GO:0000325(PANTHER)|GO:0005245(PANTHER)|GO:0005245(InterPro)|GO:0005774(PANTHER)|GO:0006816(PANTHER)
Mch4g0154 740 MobiDBLite consensus disorder prediction 693 712 - -
Mch4g0154 740 FunFam Two pore calcium channel protein 1 208 319 - -
Mch4g0154 740 ProSiteProfiles EF-hand calcium-binding domain profile. 329 364 IPR002048 GO:0005509(InterPro)
Mch4g0154 740 SUPERFAMILY EF-hand 312 401 IPR011992 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0154 K16900 - csv:101206980 1266.91