Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0174 ATGGGTTGGAAGAGATCTTCGAGTAATGGCAATTTGAGGATCTGCGTCCAGATTTTAGTCGGATTCGTGATCTGCGCAGCCCAAGTTATTTTTGGAGTAACGAATCCAGGCGATTTTGCTGCCATTAGCAGCTTACATACCTCACTGGGACTCCCCATTCTTCCTGGATGGGGCACTGGGCAAGACCCATGTGGAGATGCATGGCAGGGTGTCGTATGTAATGATTCAAGCATCATTAAAATAATTCTTAATGCTGCTAATTTGGGAGGTGAACTGGGTGACAGCTTGGGATTGTTTTCTTCCATCCAAATAATTGATTTAAGCAACAATCATATAGGGGGAAGTATTCCATCCAATGTACCCGTCACAATGCAGAACATTTTTCTTTCAGCTAATCAGTTCTCTGGAAGCATTCCGAGTTCATTATCATCTTTGGTTCAGCTGACAGCCATGTCGTTGAATGATAACAAATTAAGTGGTCAAATACCCGATTCCTTTCAAGCTATTACCGGATTGGTCAATCTGGATTTATCCAATAACAACTTGAGTGGGCCACTGCCCCCTTCCGTTGAAAACTTATTGGCATTGACCACCCTACACTTGCAGAATAATCAACTATCAGGGACCCTTGATGTTTTACAAGACCTTCCACTGAAAGACCTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGTTGCTGAGTATCCCTACTTTTAGAAAGGATGGAAACCCATTTAATTCTTCTGTTTCTCCAACATCTCCGACATCTCCGGCATCTCCTCCTGTATCTCCATCAAAGCCCTCACCAGCACCACCACTTTCTGGGGCACCACCATCGCCACCTTCTCAACAAAAACCTAGGAAACAGGCTGATGGACCATCTGCACCTGAGGAATCCAGTACTGGAAGAAATAAGAAAAGCACTAAAAGGGTTGTTTTGATAACAATTGCAGTGATATTGTCATTCGTAATTTTGGTTTTGGCATGTGTGCTTTTTATGCCAAGGTGCAGAAGGAGGAGAACGGTTGATAGTATTTCCAAGCGACATCAGCGACATCAGATAGGTGCTTATAGGGGTGAGAGAGAGAATGCTGGAAATGATGGATCCATGCACCAAACAATTGATCAGATGCCTAAAGTTCCAAAAGAGGCAGTTGTAAGGCCGAAGCAGGAAAGTCAAACAGAGGCTCAGAAGGTTCCAAAAGCTCATGAAGAGAGAGAAAGAAACAAACTGAGAATGAACGCTATTCCAAAGAAGGATGATCATGAAATAGATATGAGTGCACTTGATGTCTATCTAATGCCTCCTCCACCACCACCTCCTCCTCCCCCTCCACCACCACCTCCCGTTGAAAAGCTCACTGCCGAGCCCATTGTTCCAGCTGATGTTACTCCCATGAAGCCTCCCACCAAACGTAAAATCACCTCAACTTTTGCAAAATCTTACACCATCGCATCCCTCCAGCAATATACAAACAGCTTTTCACAGGAGAATATTCTAGGAGAAGGAATGCTGGGGAGTGTTTATAGAGCACAGCTTCCCAGTGGGAAGCTACTGGCCGTCAAGAAACTGGATAAGAGAGCATTCAGTCAGCAAAAGGATGATGAATTTCTCGAGTTAGTGAATAATATTGATAAAATCCGGCATGCCAATGTGGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTGATCTATGAGTATTGCAGTAATGGAACATTGCAGGATGCACTACACTCAGACGAAGAGTTCAGAAAAAAACTTTCGTGGAATGCTCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTACATGAGTCCTGTCAGCCACCTGTCATTCATAGGAATTTCAAGTCTGCAAATGTCCTACTTGATGAAGATCTGTCAGTGCGTGTTTCAGATTGTGGTCTCGCTCCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCAGGTCAGCTTCTAACAGCATATGGTTACGGAGCGCCAGAATTTGAGTCGGGAGTTTATACACTTGAGAGTGACGTTTATAGCTTTGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGACAGAACAAGGACCCGAGGTGAACAATTTTTAGTCAGATGGGCGATTCCACAGCTTCACGACATAGAGGCATTAACGAGCATGGTTGATTCTTCCCTCAATGGTCAATATCCTGCCAAATCCTTATCATACTTCGCGGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTTCGGCCTCCGATGTCATCGGTTGTTCAGGATTTGCTCAACATGATAAGGAGAGAACCCCATGGCAGTGGTTCCAGTGAAGATTGA 2367 44.23 MGWKRSSSNGNLRICVQILVGFVICAAQVIFGVTNPGDFAAISSLHTSLGLPILPGWGTGQDPCGDAWQGVVCNDSSIIKIILNAANLGGELGDSLGLFSSIQIIDLSNNHIGGSIPSNVPVTMQNIFLSANQFSGSIPSSLSSLVQLTAMSLNDNKLSGQIPDSFQAITGLVNLDLSNNNLSGPLPPSVENLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKLLSIPTFRKDGNPFNSSVSPTSPTSPASPPVSPSKPSPAPPLSGAPPSPPSQQKPRKQADGPSAPEESSTGRNKKSTKRVVLITIAVILSFVILVLACVLFMPRCRRRRTVDSISKRHQRHQIGAYRGERENAGNDGSMHQTIDQMPKVPKEAVVRPKQESQTEAQKVPKAHEERERNKLRMNAIPKKDDHEIDMSALDVYLMPPPPPPPPPPPPPPPVEKLTAEPIVPADVTPMKPPTKRKITSTFAKSYTIASLQQYTNSFSQENILGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDKIRHANVVELSGYCAEHGERLLIYEYCSNGTLQDALHSDEEFRKKLSWNARIRMALGAARALEYLHESCQPPVIHRNFKSANVLLDEDLSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDSSLNGQYPAKSLSYFADIISKCVQSEPEFRPPMSSVVQDLLNMIRREPHGSGSSED 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1164393 1172287 + MC04g0150 Mch4g0174 684886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0174 788 MobiDBLite consensus disorder prediction 289 305 - -
Mch4g0174 788 MobiDBLite consensus disorder prediction 258 288 - -
Mch4g0174 788 Gene3D Ribonuclease Inhibitor 40 257 IPR032675 -
Mch4g0174 788 MobiDBLite consensus disorder prediction 351 416 - -
Mch4g0174 788 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 576 785 - -
Mch4g0174 788 MobiDBLite consensus disorder prediction 386 416 - -
Mch4g0174 788 Gene3D Transferase(Phosphotransferase) domain 1 576 780 - -
Mch4g0174 788 SUPERFAMILY Protein kinase-like (PK-like) 474 772 IPR011009 -
Mch4g0174 788 Pfam Leucine Rich Repeat 148 167 IPR001611 GO:0005515(InterPro)
Mch4g0174 788 Pfam Leucine Rich Repeat 172 193 IPR001611 GO:0005515(InterPro)
Mch4g0174 788 Pfam Leucine Rich Repeat 101 119 IPR001611 GO:0005515(InterPro)
Mch4g0174 788 ProSiteProfiles Protein kinase domain profile. 498 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0174 788 Gene3D Phosphorylase Kinase; domain 1 466 575 - -
Mch4g0174 788 MobiDBLite consensus disorder prediction 247 310 - -
Mch4g0174 788 PANTHER LEUCINE RICH REPEAT KINASE 2 74 774 IPR051420 -
Mch4g0174 788 SUPERFAMILY Formin homology 2 domain (FH2 domain) 442 451 - -
Mch4g0174 788 SUPERFAMILY L domain-like 51 240 - -
Mch4g0174 788 Pfam Protein tyrosine and serine/threonine kinase 500 772 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0174 788 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 35 261 - -
Mch4g0174 788 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 465 575 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0174 Mch-Chr4:1164393 Mch8g1013 Mch-Chr8:7183135 9.52E-120 dispersed
Mch1g1840 Mch-Chr1:18462526 Mch4g0174 Mch-Chr4:1164393 1.01E-186 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77307 PF07714 PK_Tyr_Ser-Thr 8.00E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0174 - - - 0.0