Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0227 ATGACCATTAGTCCAAAGCTTTTCTCCCTTCTCTTCCTTCAGCTGATGCTCGTGTCGTCTCTCTCGAATGTTGCTGAAGCGAAGGGATTGGAACTCGGGTTTTACCGATATAGCTGTCCTGCGGTAGAGTATATCATTGGCAAAACGGGCTGTGATGGTTCTGTGTTGCTAAATTCGACGCCAAACAACCAAGCCGAGAAAGACGCCATTCCTAACCTTAGCTTAAAAGGGTTGAATATCATTGACGCCGTCAAAGCAGCCGTTGAAAAGCAGTGCCCCGGCGTCGTTTCGTGTGCCGATGTCGTCGCTTTGGTAGCTCGAGACGCCGTCAGACTGATTGGAGGGCCATTGTGGGAAGTTCCCACAGGAAGAAGGGACGGAAGAGTATCGATATCGAGGGAAGCCTTGACGAATTTGCCCCCTCCTTTCGCCAATATCTCTGCCCTAAAATCAAGTTTCCTTTCCAAAGGTCTCTCCGTCAAGGATTTGGTTGTTCTGTCCGGACTTTCGAGCTCGTGCCAGGCTCAGCTGGAGCTCGGGTTTTATTCAAAAACCTGCCCTCACGCTGAGAAAATTGTATATGATTTCGGTTGCGATGCTTCTGTGCTTTTGAACTCGAGCGCCAACAGCCAAAGCGAGAAGGCGTCTCCGCCGAATCTGACGCTGAGAGGATTTGACTTCATCGATAAAATTAAGAGTCTTCTGGAAGCCGAGTGTCCAGGAATTGTCTCTTGTGCTGACATTCTTACTTTGGTTGCAAGAGACTCTATCGCTACCATTGGCGGTCCATTTTGGAGGGTTCCAACGGGGAGAAGAGACGGTGTGATCTCGAGATCATCGGAAGCATTGGCGAGCATTCCCCCGCCGTTCGGGAACTTATCAACTCTCCAGACACTTTTCGCGAACCAGGGGATGGATCTGAAAGACCTAGTTTTACTCTCGGGCGCTCACACGATCGGGATATCCCACTGCTCGTCGTTCACAAGGCGGCTGTACAACTTCACGGGCGCGGGGGACCAGGACCCGTCGCTGGACAGCGAGTACGCGGCGAATTTGAAGGCCAAGAAGTGCAGAAGCATAAACGCGAACGGGATCGTGGAAATGGACCCGGGGAGTTTCAGGACGTTCGATCTGGGCTACTACTCGCAGGTGCTGAAGCGGAGGGGGCTGTTCCAGTCCGACGCCGCGCTCACCACCAGCCCCGTCACCAAGGCCTTCGTGGCTCAGCTGCTCAACGGCTCGCTCGAGAATTTCTTTGCGGAGTTTGGTTTGGCCATGGAAAAGATGGGCCGGATCGGGGTTAAGACCGGGGCCCAGGGCCAGATTCGGAAGCACTGCGCTCTCGTCAAC 1350 53.33 MTISPKLFSLLFLQLMLVSSLSNVAEAKGLELGFYRYSCPAVEYIIGKTGCDGSVLLNSTPNNQAEKDAIPNLSLKGLNIIDAVKAAVEKQCPGVVSCADVVALVARDAVRLIGGPLWEVPTGRRDGRVSISREALTNLPPPFANISALKSSFLSKGLSVKDLVVLSGLSSSCQAQLELGFYSKTCPHAEKIVYDFGCDASVLLNSSANSQSEKASPPNLTLRGFDFIDKIKSLLEAECPGIVSCADILTLVARDSIATIGGPFWRVPTGRRDGVISRSSEALASIPPPFGNLSTLQTLFANQGMDLKDLVLLSGAHTIGISHCSSFTRRLYNFTGAGDQDPSLDSEYAANLKAKKCRSINANGIVEMDPGSFRTFDLGYYSQVLKRRGLFQSDAALTTSPVTKAFVAQLLNGSLENFFAEFGLAMEKMGRIGVKTGAQGQIRKHCALVN 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1463068 1471729 - MC04g0188 Mch4g0227 684939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0227 450 SUPERFAMILY Heme-dependent peroxidases 30 168 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 FunFam Peroxidase 49 152 - -
Mch4g0227 450 Gene3D - 49 139 - -
Mch4g0227 450 Gene3D Peroxidase, domain 2 140 175 - -
Mch4g0227 450 PRINTS Plant peroxidase signature 308 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Plant peroxidase signature 223 236 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Plant peroxidase signature 367 382 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Plant peroxidase signature 383 400 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Plant peroxidase signature 242 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Plant peroxidase signature 261 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Plant peroxidase signature 424 437 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 FunFam Peroxidase 287 429 - -
Mch4g0227 450 Gene3D Peroxidase, domain 2 287 429 - -
Mch4g0227 450 Gene3D - 197 450 - -
Mch4g0227 450 FunFam Peroxidase 196 302 - -
Mch4g0227 450 Pfam Peroxidase 197 410 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 Pfam Peroxidase 49 169 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 CDD secretory_peroxidase 176 449 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch4g0227 450 ProSiteProfiles Plant heme peroxidase family profile. 50 171 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Haem peroxidase superfamily signature 261 273 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Haem peroxidase superfamily signature 369 384 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Haem peroxidase superfamily signature 309 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 PRINTS Haem peroxidase superfamily signature 243 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 SUPERFAMILY Heme-dependent peroxidases 176 450 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch4g0227 450 ProSitePatterns Peroxidases proximal heme-ligand signature. 309 319 IPR019793 -
Mch4g0227 450 PANTHER PEROXIDASE 25-RELATED 197 446 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Mch4g0227 450 ProSiteProfiles Plant heme peroxidase family profile. 197 450 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0227 Mch-Chr4:1463068 Mch4g2597 Mch-Chr4:26306352 4.99E-98 dispersed
Mch2g0628 Mch-Chr2:4291657 Mch4g0227 Mch-Chr4:1463068 2.25E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0227 K00430 - csv:101213629 413.69