Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0251 ATGAACTGGACCCGGCGATCCGCCGTCGGCCGCGGCTCCTCCGCCACCATCTTCCTCGCCACCACCTCCTCCGGCGACATCTTCGCCGTCAAGTCCGCCGAGCTCCCCCAATCGGATTTTCTACAAACGGAACAGGGGATTCTTTCTACTCTGTTCCACCCATCCGTTGTGGGCTACAGGGGATTCGATTTAACGAGAGAGAACGGCAAGGTAATGTATAATCTCTTCATGGAGTACGTCGCCGGCGGTTCCCTCGGCGACGAAATCGTCCGGCGTGGAGGTCGGATTAAGGAGGCGGCGGCGGGGTTCTACACGTGTCAAATTGTCAGGGGATTGGAGTATTTGCACGCGCGAGGATTGGTGCATTGCGATATTAAAGCTAGGAATATTTTGGTCGGTGAAGATGGGGTGAAGATTGCTGATTTCGGCTGCTCCAAATGGGTCTCTCAGCCGGCGGCGATCGGCGGGACACCGATGTTCATGGCGCCGGAGGTGGCGCGTGGGGAAGAACAGGGGTTTTCCTCTGACATTTGGGCGCTTGGGTGTACCTTAATCGAAATGGTCACCGGCGGTCCCCCGTGGCCCGACGCCGGAAACCCAGTTTCGGTGCTGCACCGAATTGGGTATTCCGGCGAGTCGCCGGAAATTCCCAGCTTTCTATCGGACCCGGCAAAGGATTTTTTGGGGAAATGCCTGAGAAGGGATGCAAGAGAACGGTGGAGCGCGAGTCAACTTCTGGGGCATCCATTTTTGGGGGAACTGAGTTGTGGGTCGGAGGAAATAAAGGAATTACATTCCGATTCACATTCCAATTCTCCGACGAGCATTCTGGATCAAGGACTGTGGAATTCACTGGAAGAACAGTCGTCGGAAGCTGTGGAGAAATCAGAGAGGTGGGATGATGACAGAATCAGACAGCTGTCGATGACTTCGGGGGAATTTAGGTGGGAATTGGGAGATGAGAATTGGATCACAATCAGAGAAGAAAGCAACAGAAGCTCTGTGGAAAGTGACTCCATTTTCGGGTCAACATCAGAAATGGGCTTCAGAAGAGATTATGGGAAGTGCTCGCAATTGTTAGATACAACCGTTAGGTTTAGATTAAGGAAGAATGATGTTGTAATTAGTGATCTTAGTTCCAAC 1143 52.67 MNWTRRSAVGRGSSATIFLATTSSGDIFAVKSAELPQSDFLQTEQGILSTLFHPSVVGYRGFDLTRENGKVMYNLFMEYVAGGSLGDEIVRRGGRIKEAAAGFYTCQIVRGLEYLHARGLVHCDIKARNILVGEDGVKIADFGCSKWVSQPAAIGGTPMFMAPEVARGEEQGFSSDIWALGCTLIEMVTGGPPWPDAGNPVSVLHRIGYSGESPEIPSFLSDPAKDFLGKCLRRDARERWSASQLLGHPFLGELSCGSEEIKELHSDSHSNSPTSILDQGLWNSLEEQSSEAVEKSERWDDDRIRQLSMTSGEFRWELGDENWITIREESNRSSVESDSIFGSTSEMGFRRDYGKCSQLLDTTVRFRLRKNDVVISDLSSN 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1645099 1646241 - MC04g0208 Mch4g0251 684963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0251 381 Pfam Protein kinase domain 5 251 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0251 381 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 251 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Mch4g0251 381 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524(InterPro)
Mch4g0251 381 Gene3D Transferase(Phosphotransferase) domain 1 2 315 - -
Mch4g0251 381 ProSiteProfiles Protein kinase domain profile. 3 251 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0251 381 CDD STKc_MAPKKK 2 251 - -
Mch4g0251 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0251 381 SUPERFAMILY Protein kinase-like (PK-like) 3 277 IPR011009 -
Mch4g0251 381 SMART serkin_6 3 251 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0089 Mch-Chr3:1034432 Mch4g0251 Mch-Chr4:1645099 4.27E-58 dispersed
Mch4g0251 Mch-Chr4:1645099 Mch7g1086 Mch-Chr7:14888068 5.50E-48 dispersed
Mch1g1740 Mch-Chr1:17944291 Mch4g0251 Mch-Chr4:1645099 2.57E-104 wgd
Mch2g0539 Mch-Chr2:3790771 Mch4g0251 Mch-Chr4:1645099 2.14E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77310 PF00069 Pkinase 1.10E-52 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0251 K20716 - csv:101205351 499.204