Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0260 ATGAACCCTCCAATTGGGTTTTTGCTGTTGGTGTTGATCTCCGTGCTACTCGGAGCTGATTCAAGATGCCCTAGAACTTGCGATGTAGCTTTAGGTTCGTATTTCGTGTGGCCGGATAGCAATTTGACATTCATCGGCGAAATGTTTGAGCTGCGTCCCCCTGATATCATCGTCAGCTACAACAGAGATCAAATACCCAACAGAGATTTTATTACAAGCGGAACCAGGGTCAACGTTCCATTCTCCTGCGATTGTATAAACGATTCATTTTTGGGTCATACGTTTCAGTACGTGATTAAAAGTGGAAATACTTACACCGAAATTGCGGACAAATTCTATTCGGGCATTACAACGGTGGAGATGTTGCAGAGATTCAATAGTTTTGATGCCACGAGTCTTCCCATAAATGGGAGATTGAACGTCACTGTGAAATGCTACTGTGGGGATCCTGATGTTTCCACGCTATATGGGTTGTTCGTCACTTACCCACTTCGCTCCGATGATACTTGGGGTAAGCTTCAAAGTGCTACCAATGTCAGCTCAACTTTGCTGCAGCGGTACAATGAGAATGTGAATTTCACCACAGGAAATTTGATCTTTATTCCAGGCAGAGGACTTTCAGGTGGAGCCATTGCAGGCATAATTATAGGAGCAGTACTCGGGGTTCTAATTGTAGCAGGCTGTATTTACTTTTTCATACGAAGGAGGAAGTCGAAAGGTGCCAAATTGCTGGCATTCTCCCAAGATTTATCTTCTCAAGATGGGCGTGGTCTTGTCCCTGGAAGTTCCTTGTATAAATCTACTGAACCACATGCTCAAGGTGGCGGTGGTCTAGCTGCCGTTACGGGCATTACTGTTGATAAATCAGTGGATTTCTCATATGATGAACTTGCCAAGGCCACCGACAACTTTAGCTTGGCAAACAAAATCGGTGAAGGTGGTTTCGGATCGGTTTACTTTGCCGAGCTTAGAGGAGAGAAAGCAGCAATAAAGAAGATGGACATGCAAGCTTCAAGGGAGTTCCTTGCAGAAATTAAGGTTCTAACACGCGTTCACCACTTGAACCTGGTGCGCTTGATAGGATATTGTGTTGAAAATTCTCTATTCCTAGTCTACGAGTTCATTGAAAATGGCAACTTAAGCCAACATTTACGTGGCACAGATCGGAATCCATTGCCATGGCCTAGTAGGGTCCAAATAGCCCTCGATTCAGCCCGAGGCCTTGAGTATATCCATGAGCACACAGTTCCTGTTTATATTCATCGTGATATTAAATCCGCAAACATATTGATTGACAAGAACTTTCATGGAAAGGTAGCAGACTTTGGATTAACAAAGTTGACTGAAGTTGGAAATTCGTCGCTTCCTACTCGTCTCGTGGGCACATTTGGATATATGCCACCTGAATATGCTCAATATGGTGATGTTTCTCCGAAGATCGATGTTTATGCTTTCGGCGTTGTTCTTTATGAGCTTATTTCAGCCAAGGAAGCTGTGGTGAAGACAAACAGAGCCAGCTCAGTTAATGAATCGAAAGGCCTCGTCGCTTTGTTTGAAGATGTCCTGAATCAACCTGATGCGAAAGAGAACCTTCACAAACTAGTCGACCCGAGACTCGAAGACAACTACCCTCTCGAATCGGTTTTCAAGATGGCTCAGCTAGCCAAGGCATGTACACATGAGAATCCACAGCTACGCCCAAGCATGAGATCCATTGTGGTTGCTCTCATGACACTTTCTTCTGCAACAGAGGATTGGGACGTCGGCTCGTTCTATGAAAACCAAGCTCTCGTAAACTTGATGTCAGGAAGG 1812 44.54 MNPPIGFLLLVLISVLLGADSRCPRTCDVALGSYFVWPDSNLTFIGEMFELRPPDIIVSYNRDQIPNRDFITSGTRVNVPFSCDCINDSFLGHTFQYVIKSGNTYTEIADKFYSGITTVEMLQRFNSFDATSLPINGRLNVTVKCYCGDPDVSTLYGLFVTYPLRSDDTWGKLQSATNVSSTLLQRYNENVNFTTGNLIFIPGRGLSGGAIAGIIIGAVLGVLIVAGCIYFFIRRRKSKGAKLLAFSQDLSSQDGRGLVPGSSLYKSTEPHAQGGGGLAAVTGITVDKSVDFSYDELAKATDNFSLANKIGEGGFGSVYFAELRGEKAAIKKMDMQASREFLAEIKVLTRVHHLNLVRLIGYCVENSLFLVYEFIENGNLSQHLRGTDRNPLPWPSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNRASSVNESKGLVALFEDVLNQPDAKENLHKLVDPRLEDNYPLESVFKMAQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVNLMSGR 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1693563 1697791 - MC04g0217 Mch4g0260 684972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0260 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0260 604 Gene3D Transferase(Phosphotransferase) domain 1 375 595 - -
Mch4g0260 604 SUPERFAMILY Protein kinase-like (PK-like) 288 576 IPR011009 -
Mch4g0260 604 SMART serkin_6 304 578 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0260 604 FunFam LysM receptor kinase 2 283 374 - -
Mch4g0260 604 Gene3D Phosphorylase Kinase; domain 1 290 374 - -
Mch4g0260 604 ProSiteProfiles Protein kinase domain profile. 304 579 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0260 604 Pfam Protein kinase domain 306 573 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0260 604 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524(InterPro)
Mch4g0260 604 CDD STKc_IRAK 310 573 - -
Mch4g0260 604 Pfam LysM domain 97 141 IPR018392 -
Mch4g0260 604 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 603 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Mch4g0260 604 FunFam PTI1-like tyrosine-protein kinase 3 375 590 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0260 Mch-Chr4:1693563 Mch8g1214 Mch-Chr8:8673383 9.43E-87 dispersed
Mch4g0260 Mch-Chr4:1693563 Mch4g2421 Mch-Chr4:25193825 1.18E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77311 PF00069 Pkinase 1.40E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0260 K13429 - csv:101203576 986.867