Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0284 GTTCTGTTTTTTCTCCTTCTTCTTCTTCTCTTCCCTCCCGTCGTCTTCCCGCTCAATCAAGAGGGACTGTATCTCCAGCGAGTCAAACTCGGCCTCTCCGATCCGACTCAGTCCCTATCTTCATGGAACCCTCGGGACGACACTCCCTGCAACTGGTCCGGCGTTACCTGCGATTCCGCGTCTGGCCTCGTCGTCGCCGTCGACCTCTCCGATTTTCAGCTCGCCGGCCCTTTCCCGGCCTTCATTTGCCGACTTCCCTCTCTCTCCTCACTCTCTCTTTCCAATAACGCCGTTAATGCCTCTCTTCCCGACGACGTTGCCTCCTGTGCAACCCTTCAGCGCCTTAACTTGTCTCAGAATCTCCTCTCCGGTTCTATTCCCGGCGCGCTTTCCAAGATCCCCGATCTCCGGCAGCTGGATCTCTCTGGAAACAACTTTTCCGGGGATATTCCGGCGAGTTTCGGTGGGTTTCGGCAACTTGAGACGCTTAATTTAGTTGATAATCTTCTGAATGGAACTATACCGGGTACTTTGGGCAACATTTCGAGTTTGAAACAGCTTCAACTTGCTTACAATCCATTCGCGCGGAGTGAGATACCGAGTGCATTTGGTAACTTGACGAAGCTACGGGATCTCTGGCTCGCTAACTGTAATCTTGTCGGTCAGATTCCGGCAACCGTTGGCGGGATGGCTCGGCTTAAGAATCTGGACTTGTCTAACAACAGACTCAGTGGGCCGATTCCGGTGGCACTCACTGAAATGAAAAGTTTAGTTCAAATTGAACTGTTTAACAACTCGCTCTCAGGGGAGTTGCCTTCGGGATTTTCTAACCTAACCGCACTGCGGCGAATAGATTTGTCGATGAACCACTTGACTGGAACGATTCCGGACGAGCTCTGTTCGTTACAGCTCGAGTCGCTAAATTTGTTCGAGAATCGATTGGAAGGTCCTTTGCCGGAGAGCATCGTTCGGTCGCCGTACTTGTATGAGCTTAAATTGTTTAACAACAAGCTTAGTGGGGAGTTGCCCGGTAAACTCGGCCAGAACTCCCCATTAAAGCATCTTGATGTTTCATACAACGGATTTTCTGGCGGAATCCCGGAAAACTTGTGTGCGAAAGGGACACTGGAAGAGCTTATATTGATTTACAATTTGTTTTCCGGAAGAATCCCACCGAGTCTCGGAAAATGCACCAGCTTAAGCCGGATTCGGATGAGGAATAACAAACTTTCGGGTGCGGTTCCTGACGATTTTTGGGGTCTGCCCAACGTGTATTTGCTCGAGCTCGTTGAGAATTCGCTCTCTGGGTCTATTTCTTCGATAATATCCAGCGCTAGGAATCTCTCAATTTTGATGATCTCACAAAATCAATTTTCGGGGTCGATCCCGGAAGAGATTGGATCGTTAAGCAATCTGACTGAACTTTCAGGCCATGCCAATATGTTTTGCGGTCAAATCCCCGGAACTTTGGTTAAGTTAAGCCTGTTGGGTAAACTTGATCTAAGCGAGAATAAACTATCCGGTGAATTACCAAATGGAATTGGAGCTCTGAAAAGGCTAAACGAGCTAAATTTGGAAAACAACAGGTTATCTGGTAACATCCCGAGTGAAATTGGAAGCCTACCCGTGCTTAATTATCTTGATCTCTCCAGTAACCGTCTCAGTGGAAGTATACCACTTGAATTGCAGAATTTGAAACTGAATTTGCTAAATCTGTCGAACAATCTGTTATCAGGAGAACTTCCTCCTCTTTATGCTGAGGAAATTTACAGAGAGAGCTTTCTGGGTAATCCAGGCTTGTGCAGCAACGTTCCGAGTCTTTGTCCTAGAGTTGGAAAAAGAAAAGACCAAGGTAACGTCTGGCTTCTCAGATCGATTTTTCTTCTTGCTATCGTTGTTTTTGTTGTTGGGGTCATTTGGTTCTTCTTTAAGTACAAAGAATTCAAGAAGAACAAGAAAGGAATTGCCATTTCCAAGTGGAGATCATTCCATAAACTCGGTTTCAGCGAATATGAAATAGCAGACTGCCTTAGCGAAGACAAAGTCATAGGAAGTGGAGCTTCCGGCAAAGTGTACAAAGTTGTGCTAAAAAATGGCGACGTAGTGGCCGTGAAGAAGCTATGGCAGGGAGCAAGAAAAGAGGACACCAGTTTGGATTCAGAGAAAGATGGATTTGAGGCTGAAGTTGAGACATTGGGGAAGATCCGCCACAAGAATATTGTAAGGTTGTGGTGCTGCTGCAACACCGGCAATTGCAAGCTATTGGTGTACGAGTACATGCCCAATGGGAGCTTGGGAGATTTGCTGCACGGCAGCAGAAAGCGCGTTTTGGATTGGCCGACGAGGTATAAAGTTGCTTTGGACGCAGCTGAAGGCCTTTCTTACTTGCATCACGACTGTGCTCCTCCAATTGTTCATAGGGATATTAAATCTAACAATATATTACTTGATTCTGAGTTTGGAGCTAGAGTTGCAGACTTTGGATTAGCCAAGTTTTTGAATGCTGGCAAGGGCTCAGAACCAATGTCTGTCATTGCTGGTTCTTGCGGTTACATTGCACCAGAATATGCTTATACTTTAAGAGTAAACGAAAAGAGCGACATCTACAGCTTCGGGGTGGTGATTCTAGAGTTGGTAACAGGGCGGCCTCCAAACGATCCAGAATTTGGAGAGAAAGACTTGGCAAACTGGGTATGCGCCACTGTCGACCGCAAAGGACTCGACCAAGTGATTGATCAGAAACTCGGTTCCGATTACAAGGAAGAAATCTACAGAGTCCTTGATGTGGGATTGCTCTGCACAAGCTCATTCCCAATCAACCGCCCGTCAATGAGAAGAGTCGTCAAACTGCTGCAGGAGGCTGCCACAGAAACCAGGCCCGCCAGCGCCACTGCTAGAAAGGAACCCAAGCTTTCATCCTCTTTTACCGAGTAT 2934 47.07 VLFFLLLLLLFPPVVFPLNQEGLYLQRVKLGLSDPTQSLSSWNPRDDTPCNWSGVTCDSASGLVVAVDLSDFQLAGPFPAFICRLPSLSSLSLSNNAVNASLPDDVASCATLQRLNLSQNLLSGSIPGALSKIPDLRQLDLSGNNFSGDIPASFGGFRQLETLNLVDNLLNGTIPGTLGNISSLKQLQLAYNPFARSEIPSAFGNLTKLRDLWLANCNLVGQIPATVGGMARLKNLDLSNNRLSGPIPVALTEMKSLVQIELFNNSLSGELPSGFSNLTALRRIDLSMNHLTGTIPDELCSLQLESLNLFENRLEGPLPESIVRSPYLYELKLFNNKLSGELPGKLGQNSPLKHLDVSYNGFSGGIPENLCAKGTLEELILIYNLFSGRIPPSLGKCTSLSRIRMRNNKLSGAVPDDFWGLPNVYLLELVENSLSGSISSIISSARNLSILMISQNQFSGSIPEEIGSLSNLTELSGHANMFCGQIPGTLVKLSLLGKLDLSENKLSGELPNGIGALKRLNELNLENNRLSGNIPSEIGSLPVLNYLDLSSNRLSGSIPLELQNLKLNLLNLSNNLLSGELPPLYAEEIYRESFLGNPGLCSNVPSLCPRVGKRKDQGNVWLLRSIFLLAIVVFVVGVIWFFFKYKEFKKNKKGIAISKWRSFHKLGFSEYEIADCLSEDKVIGSGASGKVYKVVLKNGDVVAVKKLWQGARKEDTSLDSEKDGFEAEVETLGKIRHKNIVRLWCCCNTGNCKLLVYEYMPNGSLGDLLHGSRKRVLDWPTRYKVALDAAEGLSYLHHDCAPPIVHRDIKSNNILLDSEFGARVADFGLAKFLNAGKGSEPMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRPPNDPEFGEKDLANWVCATVDRKGLDQVIDQKLGSDYKEEIYRVLDVGLLCTSSFPINRPSMRRVVKLLQEAATETRPASATARKEPKLSSSFTEY 978
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1818025 1821351 - MC04g0234 Mch4g0284 684996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0284 978 SUPERFAMILY Protein kinase-like (PK-like) 670 951 IPR011009 -
Mch4g0284 978 SMART LRR_typ_2 85 109 IPR003591 -
Mch4g0284 978 SMART LRR_typ_2 230 254 IPR003591 -
Mch4g0284 978 SMART LRR_typ_2 278 302 IPR003591 -
Mch4g0284 978 SMART LRR_typ_2 541 564 IPR003591 -
Mch4g0284 978 SMART LRR_typ_2 493 517 IPR003591 -
Mch4g0284 978 SMART LRR_typ_2 133 156 IPR003591 -
Mch4g0284 978 SMART LRR_typ_2 181 205 IPR003591 -
Mch4g0284 978 Pfam Protein kinase domain 679 898 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0284 978 Pfam Leucine rich repeat 208 267 IPR001611 GO:0005515(InterPro)
Mch4g0284 978 Pfam Leucine rich repeat 86 146 IPR001611 GO:0005515(InterPro)
Mch4g0284 978 Gene3D Ribonuclease Inhibitor 18 173 IPR032675 -
Mch4g0284 978 Gene3D Ribonuclease Inhibitor 174 274 IPR032675 -
Mch4g0284 978 PRINTS Leucine-rich repeat signature 541 554 - -
Mch4g0284 978 PRINTS Leucine-rich repeat signature 233 246 - -
Mch4g0284 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0284 978 SUPERFAMILY L domain-like 301 601 - -
Mch4g0284 978 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 954 IPR050647 -
Mch4g0284 978 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524(InterPro)
Mch4g0284 978 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 760 968 - -
Mch4g0284 978 MobiDBLite consensus disorder prediction 958 978 - -
Mch4g0284 978 Gene3D Ribonuclease Inhibitor 275 611 IPR032675 -
Mch4g0284 978 FunFam Receptor-like protein kinase HSL1 303 610 - -
Mch4g0284 978 SUPERFAMILY RNI-like 67 364 - -
Mch4g0284 978 Gene3D Transferase(Phosphotransferase) domain 1 760 974 - -
Mch4g0284 978 ProSiteProfiles Protein kinase domain profile. 677 971 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0284 978 FunFam Receptor-like protein kinase HSL1 660 759 - -
Mch4g0284 978 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 18 181 - -
Mch4g0284 978 Pfam Leucine Rich Repeat 281 302 IPR001611 GO:0005515(InterPro)
Mch4g0284 978 Pfam Leucine Rich Repeat 447 469 IPR001611 GO:0005515(InterPro)
Mch4g0284 978 Pfam Leucine Rich Repeat 544 565 IPR001611 GO:0005515(InterPro)
Mch4g0284 978 Pfam Leucine Rich Repeat 520 541 IPR001611 GO:0005515(InterPro)
Mch4g0284 978 Pfam Leucine Rich Repeat 352 371 IPR001611 GO:0005515(InterPro)
Mch4g0284 978 Pfam Leucine Rich Repeat 498 517 IPR001611 GO:0005515(InterPro)
Mch4g0284 978 Pfam Leucine Rich Repeat 159 180 IPR001611 GO:0005515(InterPro)
Mch4g0284 978 Gene3D Phosphorylase Kinase; domain 1 659 759 - -
Mch4g0284 978 SMART serkin_6 677 971 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0284 978 Pfam Leucine rich repeat N-terminal domain 18 58 IPR013210 -
Mch4g0284 978 FunFam Leucine-rich receptor-like protein kinase family protein 199 297 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0626 Mch-Chr10:4259756 Mch4g0284 Mch-Chr4:1818025 7.70E-94 dispersed
Mch11g0743 Mch-Chr11:5014068 Mch4g0284 Mch-Chr4:1818025 2.44E-83 dispersed
Mch1g1334 Mch-Chr1:15371501 Mch4g0284 Mch-Chr4:1818025 1.60E-73 dispersed
Mch3g1106 Mch-Chr3:14458785 Mch4g0284 Mch-Chr4:1818025 1.98E-191 dispersed
Mch4g0284 Mch-Chr4:1818025 Mch4g0836 Mch-Chr4:5907015 6.23E-93 dispersed
Mch6g0858 Mch-Chr6:5960452 Mch4g0284 Mch-Chr4:1818025 1.55E-77 transposed
Mch8g0317 Mch-Chr8:2218238 Mch4g0284 Mch-Chr4:1818025 1.07E-85 transposed
Mch1g1897 Mch-Chr1:18919743 Mch4g0284 Mch-Chr4:1818025 2.85E-156 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77312 PF00069 Pkinase 2.20E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0284 - - - 0.0