Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0429 ATGTGGCTCTTGTTCTATCCATTTGAAACAGATGGGGGAGCATGTGGTTATGGCAACTTGGCATTAGAGTTCTCTAATGGCTTTTATGCTGCTGCTGTGCCTTCCCTTTATAAACAAGGAGCTGGTTGTGGTGCTTGCTATCAAGTAAGGTGCAAAAATAGAAGAATGTGCAACACAGTTGGAACTAAAGTGGTGTTGACAGATCAAAATAATGATAATGTAACTGATCTTGTTCTTAGTAAAAGGGCTTTCTTTACCATGGCTCTCAATGGCAAGGGTGCAGACCTATTGAATCTTGGAGTTATTGATGTTGAATACAAGAGGGTGCCTTGTGAGTACAAATACAAGAACTTGGTAGTGCGAGTGGAAGAATCAAGCTACAACCCATTCTACCTAGCAATAAAATTCTTGTACCAAGGAGGCCAAACAGACATAGTAGCTGTGGACATAGCTCAAGTGGGCACCTCTGATTGGAGCCACATGAAGAGAAACTATGGAGCTGTATGGGACACCAACAACATACCAGAAGGAGCACTTCAGTTAAGGATGGTGGTGACTTCAGGATACGATGGGAAGTGGGTTTGGGCAAAATCTGTGCTTCCTGCTGATTGGAAAAGTGGAGCCATTTATGACACTGGAGTTCAAATCACTGATATTGCCAAAGAGAGTTGCCCTCCATGGCAATGTGGTGATGGGCAATGGAAATGA 708 43.22 MWLLFYPFETDGGACGYGNLALEFSNGFYAAAVPSLYKQGAGCGACYQVRCKNRRMCNTVGTKVVLTDQNNDNVTDLVLSKRAFFTMALNGKGADLLNLGVIDVEYKRVPCEYKYKNLVVRVEESSYNPFYLAIKFLYQGGQTDIVAVDIAQVGTSDWSHMKRNYGAVWDTNNIPEGALQLRMVVTSGYDGKWVWAKSVLPADWKSGAIYDTGVQITDIAKESCPPWQCGDGQWK 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2733037 2734395 - MC04g_new0081 Mch4g0429 685141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0429 235 SUPERFAMILY Barwin-like endoglucanases 9 114 IPR036908 -
Mch4g0429 235 Pfam Lytic transglycolase 30 106 IPR009009 -
Mch4g0429 235 Pfam Expansin C-terminal domain 120 201 IPR007117 -
Mch4g0429 235 PRINTS Expansin/Lol pI family signature 158 172 IPR007118 GO:0005576(InterPro)
Mch4g0429 235 PRINTS Expansin/Lol pI family signature 33 51 IPR007118 GO:0005576(InterPro)
Mch4g0429 235 PRINTS Expansin/Lol pI family signature 99 115 IPR007118 GO:0005576(InterPro)
Mch4g0429 235 PRINTS Expansin/Lol pI family signature 11 29 IPR007118 GO:0005576(InterPro)
Mch4g0429 235 PRINTS Expansin/Lol pI family signature 198 212 IPR007118 GO:0005576(InterPro)
Mch4g0429 235 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 130 212 IPR007117 -
Mch4g0429 235 Gene3D - 113 217 IPR036749 -
Mch4g0429 235 Gene3D - 5 112 IPR036908 -
Mch4g0429 235 SUPERFAMILY PHL pollen allergen 116 211 IPR036749 -
Mch4g0429 235 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 12 116 IPR007112 -
Mch4g0429 235 PANTHER EXPANSIN-B3 11 218 - GO:0009505(PANTHER)|GO:0009506(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0429 Mch-Chr4:2733037 Mch4g0432 Mch-Chr4:2755437 3.80E-118 dispersed
Mch4g0428 Mch-Chr4:2726838 Mch4g0429 Mch-Chr4:2733037 1.36E-118 tandem
Mch4g0429 Mch-Chr4:2733037 Mch4g0430 Mch-Chr4:2737509 6.67E-126 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0429 - - - 0.0