Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0457 ATGGTTATGGAGGATAACGAGAGCTGTGGGAGTAGAGCGAACGACTCGACGCCGGCGCAGAGTCGGAAACAGAGGCAAAAGTTTGAGGTTTACAATGAGGTTCTCCGGCGTCTGAAGGATTCCAACAACCAGGAGGCCATTCAGCCTGGTTTTGACGACGAGTTATGGACTCACTTCAATCGCCTACCCACTCGATATGCTCTCGACGTAAATGTGGAGAGGGCAGAAGATGTTCTCATGCATAAAAGGTTATTGCAAGTTGCTCACGATCCTGCAAATCGACCTGCAATTGAAGTCCGCCTAGTGCAGGTTCATGCCATTTCTGATGGGAATTCAGCTGATTTTGCTGATTCATATCCTGTAAAAGATGCTGATCACAATTCTGCAAATTTTTTGAGCAGACAGAGCATACATCCACCACCTGCCTTTGGGTCATCTCCTAACCTCGAGGCCCTCGCCCTTGAAGCTAATAATGCTCAGGATCTGGAGGTGGATCATTCTGTACATGCCAGAACACAGTTTTTTCGGCCGATGCATGAAATAACTTTCTCAACGGATGATAAGCCGAAACTTCTCAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAGGAGGCACATGCATTTTCCACTGTTGATGGCTTCTCCTTGGACGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAGACAGAGAGATTGAAGACTGCCTTAGAGAAGGAAGTCTTACAGGTTGAGAGGCAGGCTTGGCCAAACCATAAATCCTCATCTCCTGTAGGGGAACGTGATATAACAATTAAATGCGAGCCTGATCGGGTGGAAATACCCACGGATGGGACTGATGTATGGGAAATTAATCCTAGACATCTGAAGTTTGAGCATAAAGTTGCATCTGGGTCGTATGGGGATCTGTATAAAGGTACGTACTGCAGTCAGGAAGTGGCTATTAAAGTCCTCAAACCAGAACGTGTGAATTCAGACATGCAAAGTGAGTTTGCCCAGGAGGTATACATTATGAGAAAAGTCAGGCACAAGAATGTTGTACAGTTTATAGGTGCATGTACCAAGCCCCCAAGCCTGTGCATTGTAACAGAATTTATGTCTGGCGGTAGTGTCTACGACTATCTACATAAACAAAAGGGCACTTTTAGGCTTCCATCTTTGCTCAAGGTAGCCATTGATGTCTCCAAGGGAATGAACTACTTGCACCAAAATAATATAATTCACAGAGACCTAAAGGCTGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTTGGTGTTGCCAGAGTAAAATCTCAATCAGGAGTTATGACAGCAGAAACTGGGACGTATCGGTGGATGGCTCCTGAGGTTATAGAACATAAACCATATGATCACAAGGCCGACGTTTTCAGTTTCGGAATTGTCTTGTGGGAGTTGCTTACTGGAAAGCTACCTTATGAATTCCTAACTCCATTACAAGCTGCGGTCGGAGTCGTCCAAAAGGGTTTGCGGCCTACTATTCCGAAGCACACGAATCCCAAACTGGCTGAGTTGCTGGAAAGATGTTGGCAGCAGGACCCCTCATCTCGGCCTGACTTCTCCGAAATTATCGAGATATTGTTGCAGATAGCGAAGGAAGTTGCAGAAGACGGTGAGGACCGACGAAAGGAGAAGAGTGGAGGATTCCTTTCCGTGTTGAGAAGAAATCATCACTGA 1719 45.9 MVMEDNESCGSRANDSTPAQSRKQRQKFEVYNEVLRRLKDSNNQEAIQPGFDDELWTHFNRLPTRYALDVNVERAEDVLMHKRLLQVAHDPANRPAIEVRLVQVHAISDGNSADFADSYPVKDADHNSANFLSRQSIHPPPAFGSSPNLEALALEANNAQDLEVDHSVHARTQFFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGFSLDVFVVDGWPYEETERLKTALEKEVLQVERQAWPNHKSSSPVGERDITIKCEPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKPERVNSDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKSQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLAELLERCWQQDPSSRPDFSEIIEILLQIAKEVAEDGEDRRKEKSGGFLSVLRRNHH 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2917781 2928555 + MC04g0365 Mch4g0457 685169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0457 572 Gene3D Transferase(Phosphotransferase) domain 1 371 565 - -
Mch4g0457 572 PANTHER SERINE-THREONINE PROTEIN KINASE 29 544 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch4g0457 572 FunFam Serine/threonine-protein kinase isoform 1 282 370 - -
Mch4g0457 572 PRINTS Tyrosine kinase catalytic domain signature 512 534 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0457 572 PRINTS Tyrosine kinase catalytic domain signature 366 379 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0457 572 PRINTS Tyrosine kinase catalytic domain signature 449 459 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0457 572 PRINTS Tyrosine kinase catalytic domain signature 468 490 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0457 572 PRINTS Tyrosine kinase catalytic domain signature 403 421 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0457 572 MobiDBLite consensus disorder prediction 1 26 - -
Mch4g0457 572 Coils Coil 230 250 - -
Mch4g0457 572 CDD ACT_TyrKc 178 245 - -
Mch4g0457 572 MobiDBLite consensus disorder prediction 9 25 - -
Mch4g0457 572 ProSiteProfiles ACT domain profile. 180 259 IPR002912 -
Mch4g0457 572 Pfam Protein tyrosine and serine/threonine kinase 292 541 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0457 572 Gene3D Phosphorylase Kinase; domain 1 282 370 - -
Mch4g0457 572 SUPERFAMILY ACT-like 178 243 IPR045865 -
Mch4g0457 572 SUPERFAMILY Protein kinase-like (PK-like) 276 541 IPR011009 -
Mch4g0457 572 SMART serkin_6 292 546 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0457 572 CDD STKc_MAP3K-like 298 541 - -
Mch4g0457 572 ProSiteProfiles Protein kinase domain profile. 292 542 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0457 572 FunFam serine/threonine-protein kinase HT1 371 561 - -
Mch4g0457 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0087 Mch-Chr11:570645 Mch4g0457 Mch-Chr4:2917781 8.86E-247 dispersed
Mch2g0818 Mch-Chr2:5614355 Mch4g0457 Mch-Chr4:2917781 2.17E-46 dispersed
Mch4g0457 Mch-Chr4:2917781 Mch4g1871 Mch-Chr4:21411785 1.08E-171 dispersed
Mch4g0457 Mch-Chr4:2917781 Mch10g1800 Mch-Chr10:17693023 1.96E-283 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77318 PF07714 PK_Tyr_Ser-Thr 1.20E-75 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0457 - - - 0.0