Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0558 ATGGAGTTTTTAAGTCCCTTCTTGTTATTCTCCATTTTTTTCTTCTCTCTTTTTCTTTTAGTGATCAATTTTCTAAGGCGTAAACTCCCTTACCCGCCAGGCCCCCATGGACTACCCATCATTGGTAACATGTTGATGATGGACCAACTCACCCACCGTGGCCTCGCCCATCTCACCGCCATCTACGGTGGCCTCTTCCATCTCCGCCTCGGCGTCCTCCACATGGTCGTCGTGTCCACGCCTGAGATGGCGCGTGAGTTCCTCCAAGTTCAAGACATTGCCTTTGCCAATAGGCCAGCCAACGTGGCGATCACTTATCTCACCTACGATCGTGCTGACATGGCCTTCGCCAACTATGGCCCGTTTTGGCGCCAAATACGAAAGATTTGCGTCATGAAACTCTTCAGCCGCCGACGCGCCGAGTCGTGGGCGTCGGTGCGTGACGAAGTCAACGCCGTAGTCCGAATCATTTCGGCCAAAATCCACGAGCCAGTGAACATAGGCGAGCTGGTTTTTGGTCTAACACGAAACATAATTTACAAGGCTGCGTTCGGATCGAGCTCGCACGAAGGACAAGATGAGTTCGTGAAGATCTTGCAGGAATTCTCCAAATTGTTTGGAGCTTTTAATATTGCAGATTTTCCGTGGTTGGGTTGGATTCATGCGAGAGAATTTAATGAAAGATTGACGAGAGCGAGAGGAGCTCTCGACGTGTTCATCGATAGCATAATCGATGAACACAAAGAGAAGAAGAAAAAGGAAGAAGGAGAAGATTCAGATATGGTGGATGAATTGATGGCGTTCTTTGTTGATGAGTCAAGTAGAAGTGAGTTTGATGATTCACACTCGGTTCTTAAGCTCACTAGAGATAACATCAAAGCCATAATCATGGACGTGATGTTCGGCGGAACGGAGACGGTGGCGTCGGTAATAGAGTGGGCCATGGCGGAGCTTATGAAGAATCCGCCGGAGCTCAAAAAAGTCCAACAAGAACTCGAACAAGTCGTCGGATTAGACCGGAATCTCCACGAATCCGACCTCGAAAACCTCCCCTACTTGAAATTCGCCGTCAAAGAAACGCTCCGCCTCCACCCGCCGATTCCGCTGCTCCTCCACGAGACCGCCGTCGACACCGCCGTCGCCGGCTACTTCATTCCTGCCGGCTCCAGAGTCTGGATCAACGCTTGGGCGATCGGCCGCGACGGAGCCGCCTGGCCTGACCCGGACAGATTCCGGCCGGCGAGGTTCCAAGACGCCGCCGCGCCGGATTTCAAGGGGAGCGATTTCGAGTTCCTTCCGTTCGGGTCGGGTCGGAGGTCGTGCCCCGGAATGCAACTCGGGTTGTACGCGTGTGAGATGGCAGTGGCGAATCTTCTCCACTGTTTTAATTGGGAGTTGCCTGACGGAATGGGAACCGAAGAACTCGATATGAACGACTCGTTCGGACTCACCGCTCCGAGAGCGGTTCGACTCGTTGCCGTTCCGAGTTACCGGCTTAACTCGCCGGAGTTCGAACTCCGAGGCAAGAGATGGGAAGAT 1539 52.76 MEFLSPFLLFSIFFFSLFLLVINFLRRKLPYPPGPHGLPIIGNMLMMDQLTHRGLAHLTAIYGGLFHLRLGVLHMVVVSTPEMAREFLQVQDIAFANRPANVAITYLTYDRADMAFANYGPFWRQIRKICVMKLFSRRRAESWASVRDEVNAVVRIISAKIHEPVNIGELVFGLTRNIIYKAAFGSSSHEGQDEFVKILQEFSKLFGAFNIADFPWLGWIHAREFNERLTRARGALDVFIDSIIDEHKEKKKKEEGEDSDMVDELMAFFVDESSRSEFDDSHSVLKLTRDNIKAIIMDVMFGGTETVASVIEWAMAELMKNPPELKKVQQELEQVVGLDRNLHESDLENLPYLKFAVKETLRLHPPIPLLLHETAVDTAVAGYFIPAGSRVWINAWAIGRDGAAWPDPDRFRPARFQDAAAPDFKGSDFEFLPFGSGRRSCPGMQLGLYACEMAVANLLHCFNWELPDGMGTEELDMNDSFGLTAPRAVRLVAVPSYRLNSPEFELRGKRWED 513
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 3540876 3543075 - MC04g0442 Mch4g0558 685270
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0558 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch4g0558 513 CDD CYP71-like 62 491 - -
Mch4g0558 513 PANTHER CYTOCHROME P450 84A1-RELATED 8 502 IPR053062 GO:0004497(PANTHER)
Mch4g0558 513 SUPERFAMILY Cytochrome P450 32 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 Pfam Cytochrome P450 32 486 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 Gene3D Cytochrome P450 25 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 FunFam Cytochrome P450 84A1 24 497 - -
Mch4g0558 513 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0558 513 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1563 Mch-Chr1:16881486 Mch4g0558 Mch-Chr4:3540876 8.32E-239 dispersed
Mch4g0558 Mch-Chr4:3540876 Mch8g1025 Mch-Chr8:7237681 6.89E-115 dispersed
Mch4g0558 Mch-Chr4:3540876 Mch3g1399 Mch-Chr3:16503374 6.09E-111 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0558 K09755 - csv:101217850 811.216