Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0569 ATGGGCGATTCCCGAGGAGGTTGCTGTCCGTCCATGGATCTGTTCCGCTCGGAGCCGATGCAGCTTGTGCAGCTCATCATTCCCATCGAGTCTGCGCATCTCACTGTCTCCTACCTCGGTGATCTCGGCCTTCTCCAGTTCAAAGATCTCAATGCTGAGAAAAGCCCGTTCCAACGTACTTATGCTGCACAGATTAAAAGATGTGGAGAGATGGCACGCAAATTGCATTTTTTCAAGGAGCAGATGTCGAAGACTGGATTGTCAAGCAAAAGCTCCGTTCCACAAATTGATATCAGTGTAGACGACCTTGAGGTCAAACTTGGTGAGCTTGAGGCAGAACTGGTTGAAATAAATGCCAATAGTGAGAAGCTACAGCGTTCCTACAATGAACTTGTGGAGTATAAGCTTGTTATGCATAAGGCTGGTGAGTTTTTCAGTGCAGCGCAAAGCAGTGCCCTTGAGCAGCAAAGAGAATTTGAATCACAACGAGTTGGTGGAGATTCAATAGAAGTTCCTTTATTGTTGGAACAAGAATCATCTGTGGATCAGTCAAAGCCGATTAATTTGGGATTTATCTCTGGCCTTGTGCCTCGGGAAAAATCTATGGCATTTGAGAGGATACTATTTCGTGCCACCAGGGGTAATGTGTTTCTGAAGCAGGCTGTAGTTGAGGATCCGGTTGCAGATCCTATTTCTGGAGAGAAGATTGAGAAAAACGTGTTTGTTGTTTTCTACTCTGGAGAAAGAGCGAAGAATAAAATTCTAAAAATATGTGAGGCATTTGGAGCAAATCGTTACCCTTTTAATGAGGACTTGGGGAAACAAGCCCAAATGATTGCCGAGGCATCTGGAAGACTGTCTGAGATGAAGACTACAATAGATGTAGGGCTGCTACACCGGGGTAATCTGTTGCGGACTATTGGAGAACATTTTGAAAATTGGAATCTTCTGGTGAGGAAGGAAAAATCTATATACCATATCTTGAACATGCTTAGCCTTGACGTAACCAAAAAGTGTCTGGTGGCTGAGGGGTGGGGTCCTGTTTTTGGAACAAAGCAGATTCAAGATGCACTCCAGCGGGCAGCAACTGATTCCAACTCCCAGGTTGGACCAATTTTCCAGGTTTTGTTAACTACAGAAGCACCACCTACTTATTTTCGGACAAACAAATTCTCCACTGCTTTTCAAGACATTGTGGATGCATATGGGGTGGCAAAGTATCAAGAAGCCAATCCTGGTGTATACACCATTGTCACGTTTCCATTTCTATTTGCTGTTATGTTTGGTGATTGGGGGCATGGAATATGTCTGTTACTTGCAACACTGTATTTTATATTACGGGAAAAAAAACTTTCTTCTCAGAAGCTTGGAGATATCACTGAAATGGCCTTTGGTGGACGCTACGTCATTTTGATGATGTCACTTTTTTCAATATACACAGGTCTGATCTATAATGAGTTCTTCTCAGTCCCATTTGGACTGTTTGGTCACTCAGCATATGCATGTCGTAGTCCTGATTGCAGTGATGCTGCTACTGCGGGGTTGATAAAGGTGGGTTCTACATATCCATTTGGCTTGGATCCTGTATGGCATGGTACTCGAAGCGAGCTTCCATTTCTTAACTCTCTGAAAATGAAAATGTCGATCCTCCTTGGAGTTGCACAAATGAACCTTGGAATCATAATAAGCTATTTCAATGCTACATTTTTTCGGAATAGTATCAATATCTGGTTCCAATTCCTGCCACAGATGATATTTCTGAACAGCCTTTTCGGTTATCTTTCCCTTCTTATCATCCTAAAATGGTGCACTGGTTCAAAAGCTGATCTGTACCACGTAATGATATACATGTTCCTGAGCCCCACAGACGATCTGGGTGAAAATCAGCTTTTTGCCGGGCAGAAAAATGTTCAGATTGTGCTGCTCTTACTGGCCCTTGTTGCTGTACCATGGATGCTGCTTCCAAAGCCTTTTCTTTTGAAGAAACAGCACGAACAGAGGTTCCAAGGCCAGTCTTATGCACCACTTCCAAGTGCTGACGATTCCCTTGAGTTGGAGTCGCATCATGATTCACACGGTCATGAGGAGTTTGAGTTCGGTGAAGTTTTTGTGCATCAACTTATACATACCATTGAATTTGTGCTTGGAGCGGTATCAAATACAGCTTCCTATCTTCGTCTATGGGCTTTAAGTCTTGCTCACTCAGAGTTGTCCAGCGTGTTCTATGAGAAGGTTCTCGTTCTATCTGCGGGGTACAACAACATACTAATCTTAATAGTGGGCGGGATTGTTTTCATTTTCGCTACCGTTGGTGTGTTGCTACTGATGGAGACTCTAAGTGCCTTCCTTCATGCGTTGCGTCTTCATTGGGTCGAGTTCCAAAACAAGTTCTACGAGGGAGACGGGTACAAATTCCATCCTTTCTCGTTTGCATTGCTCGACGAAGATGACGAATAA 2457 43.63 MGDSRGGCCPSMDLFRSEPMQLVQLIIPIESAHLTVSYLGDLGLLQFKDLNAEKSPFQRTYAAQIKRCGEMARKLHFFKEQMSKTGLSSKSSVPQIDISVDDLEVKLGELEAELVEINANSEKLQRSYNELVEYKLVMHKAGEFFSAAQSSALEQQREFESQRVGGDSIEVPLLLEQESSVDQSKPINLGFISGLVPREKSMAFERILFRATRGNVFLKQAVVEDPVADPISGEKIEKNVFVVFYSGERAKNKILKICEAFGANRYPFNEDLGKQAQMIAEASGRLSEMKTTIDVGLLHRGNLLRTIGEHFENWNLLVRKEKSIYHILNMLSLDVTKKCLVAEGWGPVFGTKQIQDALQRAATDSNSQVGPIFQVLLTTEAPPTYFRTNKFSTAFQDIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFILREKKLSSQKLGDITEMAFGGRYVILMMSLFSIYTGLIYNEFFSVPFGLFGHSAYACRSPDCSDAATAGLIKVGSTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFRNSINIWFQFLPQMIFLNSLFGYLSLLIILKWCTGSKADLYHVMIYMFLSPTDDLGENQLFAGQKNVQIVLLLLALVAVPWMLLPKPFLLKKQHEQRFQGQSYAPLPSADDSLELESHHDSHGHEEFEFGEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLVLSAGYNNILILIVGGIVFIFATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFALLDEDDE 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3625781 3640031 + MC04g0450 Mch4g0569 685281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0569 818 Pfam V-type ATPase 116kDa subunit family 38 810 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Mch4g0569 818 PANTHER VACUOLAR PROTON ATPASES 12 816 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
Mch4g0569 818 Coils Coil 100 127 - -
Mch4g0569 818 PIRSF ATP6V0A1 10 818 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0972 Mch-Chr2:6572280 Mch4g0569 Mch-Chr4:3625781 0 dispersed
Mch4g0569 Mch-Chr4:3625781 Mch8g0816 Mch-Chr8:5767645 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0569 K02154 - csv:101211364 1476.46