Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0590 AAGCAGAACCCTCAATTTGCTGTTGAGGCCTTGACTAACTTGACCTTTTTGCAGTCCTTTAATGCTTCAAATTTCTTGCTTCCGGGTGTCGTTCCTGAGTGGTTCGGGCAGCGTCTCGGCTTGCTGCGAGTGCTTGATCTGCGGTCTTGTTCCATATTTGGTTCTATTCCATTGAGTCTGGGGAATTTGAACAACCTGACTGGTCTTTATCTGTCTGATAATAGACTTACTGGGACACTGCCTTCTAATTTGGGCAAACTGTTCAGCCTTTCATTTCTTGATTTGTCACATAATACATTCACAGGAATGATTCCTCCCTCGCTTGAATCTCTTGGCAATCTTTCTCTGCTTGACCTTTCATCTAATTACTTAGCAGGGTCGATCCCTCCAGGCATTGGGAGCCTATTGAAGCTTCGGTATCTAAATCTTTCAAATAACAGTTTGTCTTCTTCAATACCTGCTCAATTTGGAGGGCTTGTTAGCTTAGTTGACCTTGACCTTAGTGTCAATTCTTTGTCTGGACCATTGCCTACGGATTTAAGAAAATTAACGAGCTTGCGAAGCATGGTATTCAGGAGAAATTTTCTTGTTGGTTCCTTGCCTGACACTTTGTTCCGCACTTTAACACAGTTGCAATCCTTGGTTCTGAGAAGTAATAACTTTTCTGGCTCGATCCCTGATGTGTTCTGGTCAATGCCCAGATTGAAGCTTGTTGATGTTTCCGGGAATAGTTTAACGGGAATGCTGCCTAATTCTAGCTCAAGTTTGAATATTACTGGTGCTGTACTTAATGCATCTCAGAATATGTTTTATGGGAGCCTTACACCCATATTGACAAGATTTAGTGCCATTGATCTGTCGGGAAACTACTTTGAAGGCAGAATTCCTGAATATCTACTCGCCAACCTATCTTTCGTGAGTAACTGCCTCCAAAATGTGGCTAACCAGAGGACACTGGCTGTATGTACATCTTTCTATTCTGCAAGGGGCCTCACTTTCGATAATTTCGGCTTGCCCAAGGCGACAGGCCCAACACAACCTCCGCCAGCAGAAGAATCCAAGAAGAGCAGTAGAAATGCTATTATCTTGGGCAGTGTTATTGGTGGAAGTGCTCTTATCTTGCTACTAGTGTTGCTGATACTTTTCTTCCTCTTGAAGGAACTGGAGATGGCGACGGATGGATTTCTGGAACAAAATGTGATCGGAGAAGGAGGCTACGGCATCGTGTATAGAGGAGTTTCGCCGGACGGCTCTGTCGTAGCCGTGAAGAATCTTCTGAACAATAAGGGTCAGGCAGAGAAAGAGTTCAAGGTTGAAGTAGAGGCCATTGGAAAAGTGAGGCACAAGAACTTGGTGGGTCTGATAGGTTATTGTGCAGATGGAGTACAGAGGATGCTTGTGTATGAATTTGTTGATAATGGTAACTTGGAGCAATGGCTACATGGTGATGTTGGACCTGTTAGTCCTCTAACATGGGATATTAGGATGAAGATTGCTCTTGGGACTGCAAAGGGTTTGGCCTATTTGCATGAGGGTTTAGAACCTAAAGTTGTGCACCGTGATGTAAAGTCGAGCAACATTCTCTTAGATAGAAAATGGAATGCAAAAGTGTCCGACTTTGGACTTGCAAAGCTCTTACAACCTGAAGCCACTTACGTAACTACTCGTGTAATGGGGACCTTTGGATACGTCTCGCCCGAGTATGCAAGTACTGGCATGCTTAACGAGGGAAGTGATGTATATAGTTTTGGAGTTCTACTTATGGAGATCATTACTGGCAGAAGCCCAATTGACTATTCCAGACCCCCTGGAGAGATGAACTTGGTGGACTGGTTTAAAGGAATGGTGGCAAATCGACGTGGTGAAGAGGTTGTAGATCCGTTGATTGAGGTTCCGCCCTCTCCAAGAGCTTTAAAGCGAGTTTTGCTTGTTTGTCTACGCTGCATCGATTTGGATGCCAATAAAAGGCCAAAGATGGGGCAGATAGTCCATATGCTGGAGGCAGACGACTTCCCTTATCGTTCGGAGCTTCGATCCGTGCGGGAGAAAGATAACCAACCATCTCGTTTAGAAGTGCCCAGTAAACTTCCATTGAAGCATGCTGGTATGGATGACATGGAATCAAGCAAGAGATAA 2136 44.43 KQNPQFAVEALTNLTFLQSFNASNFLLPGVVPEWFGQRLGLLRVLDLRSCSIFGSIPLSLGNLNNLTGLYLSDNRLTGTLPSNLGKLFSLSFLDLSHNTFTGMIPPSLESLGNLSLLDLSSNYLAGSIPPGIGSLLKLRYLNLSNNSLSSSIPAQFGGLVSLVDLDLSVNSLSGPLPTDLRKLTSLRSMVFRRNFLVGSLPDTLFRTLTQLQSLVLRSNNFSGSIPDVFWSMPRLKLVDVSGNSLTGMLPNSSSSLNITGAVLNASQNMFYGSLTPILTRFSAIDLSGNYFEGRIPEYLLANLSFVSNCLQNVANQRTLAVCTSFYSARGLTFDNFGLPKATGPTQPPPAEESKKSSRNAIILGSVIGGSALILLLVLLILFFLLKELEMATDGFLEQNVIGEGGYGIVYRGVSPDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLIGYCADGVQRMLVYEFVDNGNLEQWLHGDVGPVSPLTWDIRMKIALGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLQPEATYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEEVVDPLIEVPPSPRALKRVLLVCLRCIDLDANKRPKMGQIVHMLEADDFPYRSELRSVREKDNQPSRLEVPSKLPLKHAGMDDMESSKR 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3851061 3900609 + MC04g0464 Mch4g0590 685302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0590 711 Gene3D Ribonuclease Inhibitor 204 309 IPR032675 -
Mch4g0590 711 Gene3D Transferase(Phosphotransferase) domain 1 471 680 - -
Mch4g0590 711 SUPERFAMILY RNI-like 10 250 - -
Mch4g0590 711 SUPERFAMILY Protein kinase-like (PK-like) 375 667 IPR011009 -
Mch4g0590 711 Gene3D Phosphorylase Kinase; domain 1 376 470 - -
Mch4g0590 711 Pfam Protein tyrosine and serine/threonine kinase 399 666 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0590 711 Gene3D Ribonuclease Inhibitor 4 103 IPR032675 -
Mch4g0590 711 Gene3D Ribonuclease Inhibitor 104 203 IPR032675 -
Mch4g0590 711 SMART LRR_typ_2 111 134 IPR003591 -
Mch4g0590 711 SMART LRR_typ_2 208 231 IPR003591 -
Mch4g0590 711 SMART LRR_typ_2 232 255 IPR003591 -
Mch4g0590 711 SMART LRR_typ_2 135 158 IPR003591 -
Mch4g0590 711 SMART LRR_typ_2 63 87 IPR003591 -
Mch4g0590 711 SMART LRR_typ_2 183 207 IPR003591 -
Mch4g0590 711 FunFam Leucine-rich repeat receptor protein kinase EMS1 105 203 - -
Mch4g0590 711 MobiDBLite consensus disorder prediction 679 711 - -
Mch4g0590 711 CDD STKc_IRAK 401 667 - -
Mch4g0590 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g0590 711 Pfam Leucine Rich Repeat 65 87 IPR001611 GO:0005515(InterPro)
Mch4g0590 711 Pfam Leucine Rich Repeat 89 111 IPR001611 GO:0005515(InterPro)
Mch4g0590 711 Pfam Leucine Rich Repeat 42 63 IPR001611 GO:0005515(InterPro)
Mch4g0590 711 FunFam serine/threonine-protein kinase PBS1-like 376 470 - -
Mch4g0590 711 ProSiteProfiles Protein kinase domain profile. 395 674 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0590 711 FunFam Putative receptor-like serine/threonine-protein kinase 471 681 - -
Mch4g0590 711 SMART serkin_6 395 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g0590 711 PANTHER OS01G0323000 PROTEIN 382 686 IPR052232 -
Mch4g0590 711 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515(InterPro)
Mch4g0590 711 Pfam Leucine rich repeat 185 245 IPR001611 GO:0005515(InterPro)
Mch4g0590 711 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524(InterPro)
Mch4g0590 711 PRINTS Leucine-rich repeat signature 90 103 - -
Mch4g0590 711 PRINTS Leucine-rich repeat signature 111 124 - -
Mch4g0590 711 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 8 104 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0190 Mch-Chr11:1219430 Mch4g0590 Mch-Chr4:3851061 6.29E-39 dispersed
Mch4g0590 Mch-Chr4:3851061 Mch8g0674 Mch-Chr8:4797631 3.43E-160 dispersed
Mch2g1117 Mch-Chr2:7588500 Mch4g0590 Mch-Chr4:3851061 1.73E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77320 PF00069 Pkinase 2.10E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0590 - - - 0.0