Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0644 ATGAGTTCCTCTTCTTCTTCCTCCGAACGGCCACTGAAACCCATTCCCGGCGGCTACGGCTTCTCCATTTTTGGGCCCATCAAGGATCGCTACGACTACTTCTACATCCAAGGCCGAGAAAAGTTCTTCCGAACCCGGATGAGTAAATACGGGTCAACCGTTTTCCGGGTCAACATGCCGCCAGGTCCCTTCATCTCCTCCGATTCCAGAGTCATCGTCCTCCTCGACGCTGTCAGTTTTCCGATCCTCTTCGACACCACCAAGGTCGAGAAACGCAACGTTCTTGACGGAACTTACATGCCGTCGGTGGCCTTCACCGGCAATATTCGCACGTGCGCTTTTCTTGACCCGTCGGAGCCAGAGCACTCTGCTCTCAAGCGCCTGTTCCTCTCTTTTCTCGCCTCTCGCCACGACAAGTTTGTTCCCCTGTTCCGGAGCTCCTTGTCGGATATGTTCGATAAGCTGGACGGGAAATTGGAGGAAAAGAACGCCGCTGCCGCCGATTTCAATCCGATGAGTGACGCGGCGGCGTTTGACTTCATCTTCCGGCTGCTCACCGATCGGAGCCCCGACGAGAAATTGGGATCCGAGGGGCCGGGTCTTGTCGATAAATGGCTGGCCATGCAGCTCGCGCCGTTGGCTTCTGCCGGCCTCCCCAAATTCCTCAGCTGCTTCGAAGATCTCGTCATCCACACTTTTCCATTGCCCTTCTTCCCCGTCAAAAGTTCCTACAGGAAGCTGTACGATGCGTTTTACGCATCCTCTGTTTCGTTTCTGGACGAAGCAGAGAGACAGGGGATAGACAGAGAGGAAGCCTGCCACAATTTAGTGTTCCTGGCCGGATTCAACGCGTACGCCGGAATGAAGGTGATGCTTCCGATTCTGCTCAATTGGGTCGGGTCCGCCGGCGAAGGGCTCCACCGGGAGCTCGCCGAGGAGGTCAGAACCGTCGTCAAGGAAGAAGGGGGCTTGACTTTGGGCGCAATAGAGAAGATGAGGCTGCTGAAATCCGTCGTGTACGAGGTTCTGAGGATCGACCCGCCGGTGCCGTACCAGTACGCGCGGGCGAAAGAAGATATCGTGATCCAAAGCCACGATTTCTCCTACAAGATAAAGAAAGGGGAGATGATTTTTGGGTATCAGCCGATCGCGACCAGAGACCCGAAGGTTTTCGAGAATCCGGAGAAGTTCGTCGGCGACAGGTTCGTCGGAGAGAAAGGGGAGAAGCTTCTGAATTATGTTTACTGGTCGAACGGCCGGGAGACGGAGGAGCCGACGGCGGAGAACAAGCAGTGTCCGGCGAAGGATCTGGTGGTGCTGGTGGCCAGGCTAATTCTGGTGGAGCTCTTCCTCCGTTACGACTCGTTTACCGTCGAGGGGACTCAGTCGTCGCTCGGATGGACAGTGAAGATCAAATCGTTGACCAAATCGACCGCTAAGGTTTGA 1446 55.46 MSSSSSSSERPLKPIPGGYGFSIFGPIKDRYDYFYIQGREKFFRTRMSKYGSTVFRVNMPPGPFISSDSRVIVLLDAVSFPILFDTTKVEKRNVLDGTYMPSVAFTGNIRTCAFLDPSEPEHSALKRLFLSFLASRHDKFVPLFRSSLSDMFDKLDGKLEEKNAAAADFNPMSDAAAFDFIFRLLTDRSPDEKLGSEGPGLVDKWLAMQLAPLASAGLPKFLSCFEDLVIHTFPLPFFPVKSSYRKLYDAFYASSVSFLDEAERQGIDREEACHNLVFLAGFNAYAGMKVMLPILLNWVGSAGEGLHRELAEEVRTVVKEEGGLTLGAIEKMRLLKSVVYEVLRIDPPVPYQYARAKEDIVIQSHDFSYKIKKGEMIFGYQPIATRDPKVFENPEKFVGDRFVGEKGEKLLNYVYWSNGRETEEPTAENKQCPAKDLVVLVARLILVELFLRYDSFTVEGTQSSLGWTVKIKSLTKSTAKV 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4244713 4246971 - MC04g0505 Mch4g0644 685356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0644 481 Pfam Cytochrome P450 308 415 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0644 481 SUPERFAMILY Cytochrome P450 10 464 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0644 481 FunFam Allene oxide synthase, chloroplastic 10 479 - -
Mch4g0644 481 PANTHER CYTOCHROME P450 26 15 453 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Mch4g0644 481 PRINTS E-class P450 group IV signature 332 348 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0644 481 PRINTS E-class P450 group IV signature 385 403 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0644 481 PRINTS E-class P450 group IV signature 369 383 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch4g0644 481 CDD CYP74 44 472 - -
Mch4g0644 481 Gene3D Cytochrome P450 6 479 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0644 Mch-Chr4:4244713 Mch6g2569 Mch-Chr6:27583441 2.27E-06 dispersed
Mch4g0644 Mch-Chr4:4244713 Mch4g0645 Mch-Chr4:4256782 3.54E-273 tandem
Mch4g0256 Mch-Chr4:1674661 Mch4g0644 Mch-Chr4:4244713 2.41E-134 transposed
Mch4g0644 Mch-Chr4:4244713 Mch8g0738 Mch-Chr8:5224902 1.87E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0644 K01723 - csv:101211574 770.0