Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0683 ATGGTGGAATCGAACCTGGCCTACGAGGAATGCCGACGCCAGAGGTTGGAGGAGAACAAGAAGAGGATGGAAGAGCTTAATCTCAACAAGCTTGCCGATGCTCTCAAATCTTCCAGCCCTAAGTCCTCTCCGACGAAGCAGCTGAAGCGTCCTCGCCGCCCGCTCGATGTCTCGTCCGTCAGTGTGAGAAGATCCAGCCGTTTTGCGGATAAGCCCCCTCCGAACTATAAGGAGGTGCCCATTGAACCACTTCCAGGTGTCAGAAGGATATATCAACGGAGAGATTTGTTGAGTCGAGTTTATGCTTCACAAGAAGAAAGGCAATATGCAGTTGACAGAGCACTGGAACTTCAGTCTAGCTTGGAATCTAGGTACCCAAATTTTGTGAAGCCCATGCTTCAGTCACATGTCACCGGGGGATTTTGGCTGGGTCTTCCAGTTCAATTTTGCAAGACGCACCTTCCCCTTGAGGATGAAATGATTACTCTGGTGGATGAGGATGAAAACGAGTTCCAAACTAAATACCTCGCCGAGAAGACGGGTCTTAGCGGTGGTTGGAGAGGGTTTTCCATGGATCACCAGTTAGTAGATGGGGATGCTGTGGTGTTTCAGTTAACTAAGCCAACTGAATTCAAGGTGTATACATCATCAGGGCATATAATTCCGAAGACAAAAAAGCAGACACCAAAGAGGATTCCGATGTCTCTCAGGTGGAAAGAAGCGGCAAAAGAACTACTAGATCAGCAAGTAAAGGGAGAAAATAGCTCAAAGCGTTGCCTTTGCCACGTGGCTTGTGACAAGGAGAAGTATCCAAGACTTTTTGGGAAAAAGAGAGTTTTCAGGATATTTTGTCAGTCTTAG 861 47.39 MVESNLAYEECRRQRLEENKKRMEELNLNKLADALKSSSPKSSPTKQLKRPRRPLDVSSVSVRRSSRFADKPPPNYKEVPIEPLPGVRRIYQRRDLLSRVYASQEERQYAVDRALELQSSLESRYPNFVKPMLQSHVTGGFWLGLPVQFCKTHLPLEDEMITLVDEDENEFQTKYLAEKTGLSGGWRGFSMDHQLVDGDAVVFQLTKPTEFKVYTSSGHIIPKTKKQTPKRIPMSLRWKEAAKELLDQQVKGENSSKRCLCHVACDKEKYPRLFGKKRVFRIFCQS 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4561040 4563872 + MC04g_new0151 Mch4g0683 685395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0683 286 SUPERFAMILY DNA-binding pseudobarrel domain 121 215 IPR015300 -
Mch4g0683 286 Pfam B3 DNA binding domain 128 214 IPR003340 GO:0003677(InterPro)
Mch4g0683 286 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 12 216 IPR044837 -
Mch4g0683 286 SMART B3_2 128 219 IPR003340 GO:0003677(InterPro)
Mch4g0683 286 Gene3D - 104 217 IPR015300 -
Mch4g0683 286 Coils Coil 6 33 - -
Mch4g0683 286 CDD B3_DNA 126 214 IPR003340 GO:0003677(InterPro)
Mch4g0683 286 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677(InterPro)
Mch4g0683 286 MobiDBLite consensus disorder prediction 31 80 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0683 Mch-Chr4:4561040 Mch8g0707 Mch-Chr8:5029350 5.13E-66 dispersed
Mch10g0509 Mch-Chr10:3333702 Mch4g0683 Mch-Chr4:4561040 6.80E-35 wgd
Mch4g0683 Mch-Chr4:4561040 Mch8g0706 Mch-Chr8:5021858 1.19E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43168 PF02362 B3 2.20E-15 CL0405 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0683 - - - 0.0