Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch4g0691 | ATGGAGATTCTCTCTGTTACTCTGTGCACAATACTCCTCTTTCTCTCTGCTTTTTTCTCACTCCCATTCCTGAAGAGAATGAAGAAGAAAAAGGCCCAAAAAATTGCTAGGCTTCCTCCTGGCTCCATGGGGCTGCCATGGATTGGAGAAACTCTGCAACTCTACTCTCAAGACCCCAACATTTTTTTCTCCGAAAAACAGAGAAGATATGGGGAAATCTTTAAGACCAATATTTTGGGGTGTCCTTGCGTGATGCTGGCCAGCGCCGCCGCGGCCCGGTTCGTTCTGGTGACTCACGCCAGCTTTTTCCGGCCGACGTACCCCAAAAGTAAGGAGACGATGATCGGCCCGGCGGCGCTCTTCTTCCACCAGGGAAATTACCATTCCCACCTCCGGAAGCTCGTCCAGAGCTCCCTTTCTCTTGAACGCCTCAGAAACCTTGTTCCCGACATTGAAGCCGCCGCCATTTCAGCCGCCGACTCCTGGGCCGCCGCCGGCCAGGTCATCAACACCTACCTCCAAATGAAAAAGTTTTCTTTCCAGGTGGGGATTCTAGCAGTGTTTGGTCAACTGGAAAGTGAGTACAGCGAGAAGCTCAAACAAAATTACTGCATATTGGACAAAGGCTACAACTCTTTTCCCACAAAACTTCCAGGAACCGCATATTCAAAAGCATTATCGGCGAGGAAGAGGCTGAGGAAGATTCTGGGGGAGATAATTATGGAGAGGAGAGAGAAGAGGGTATCGGAGAGAGATCTGGTGGGGCATCTTCTGAGCTTCAGAGATGAAAAAGGGGAGACTTTGTCGGAGGATGAGATCGCCGACAATATCATCGGAGTTCTGTTCGCCGCCCAGGACACGACGGCGAGTGCGCTGACGTGGATTCTCAAGTATCTCCACGACAATCACAAGCTCTTCCACGCTGTCAGGGCAGAGCAGATGGAAATTTATAGAACAAATTGTGAGGGGAGGATTCCTCTGTCTTGGGCTCAGATTAAGGACATGCCCTTCACTCACAGGGTTGTATTAGAGAGCTTGAGAATGGCTAGCATCATATCCTTCACTTTTAGGGAGGCAGTGGTTGATGTGGAATACAAAGGGTACCTTATACCAAAGGGTTGGAAGGTGATGCCCTTATTCAGGAATATTCATCACAACCCTGACTACTTCTCTGATCCCCACATTTTTGATCCCTCTAGATTTGAGGTAGCTCCAAAACCCAATACGTTCATGCCATTTGGTAATGGAGTACATGCTTGTCCGGGGAACGAACTCGCTAAGTTAGAAATCCTCATCTTACTCCATCACCTCGTTACTAAATTTAGGTGGGAAGTTGTGGGATCAGAAAACGGGGTTCAATATGGGCCATTCCCAGTGCCAGTCAACGGGCTACCGGCCAGATTTTCCAAACAAATAACAGCCAACCAATAG | 1431 | 48.85 | MEILSVTLCTILLFLSAFFSLPFLKRMKKKKAQKIARLPPGSMGLPWIGETLQLYSQDPNIFFSEKQRRYGEIFKTNILGCPCVMLASAAAARFVLVTHASFFRPTYPKSKETMIGPAALFFHQGNYHSHLRKLVQSSLSLERLRNLVPDIEAAAISAADSWAAAGQVINTYLQMKKFSFQVGILAVFGQLESEYSEKLKQNYCILDKGYNSFPTKLPGTAYSKALSARKRLRKILGEIIMERREKRVSERDLVGHLLSFRDEKGETLSEDEIADNIIGVLFAAQDTTASALTWILKYLHDNHKLFHAVRAEQMEIYRTNCEGRIPLSWAQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPDYFSDPHIFDPSRFEVAPKPNTFMPFGNGVHACPGNELAKLEILILLHHLVTKFRWEVVGSENGVQYGPFPVPVNGLPARFSKQITANQ | 476 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 4614509 | 4618757 | - | MC04g0537 | Mch4g0691 | 685403 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch4g0691 | 476 | FunFam | Abscisic acid 8 | 28 | 470 | - | - | |
| Mch4g0691 | 476 | Pfam | Cytochrome P450 | 39 | 446 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | CDD | CYP90-like | 67 | 470 | - | - | |
| Mch4g0691 | 476 | PANTHER | CYTOCHROME P450 26 | 37 | 448 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Mch4g0691 | 476 | Gene3D | Cytochrome P450 | 27 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | PRINTS | E-class P450 group I signature | 420 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | PRINTS | E-class P450 group I signature | 339 | 357 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | PRINTS | E-class P450 group I signature | 379 | 403 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | PRINTS | E-class P450 group I signature | 272 | 289 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | PRINTS | E-class P450 group I signature | 410 | 420 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 413 | 422 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch4g0691 | 476 | PRINTS | P450 superfamily signature | 283 | 300 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | PRINTS | P450 superfamily signature | 340 | 351 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | PRINTS | P450 superfamily signature | 411 | 420 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | PRINTS | P450 superfamily signature | 420 | 431 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch4g0691 | 476 | SUPERFAMILY | Cytochrome P450 | 36 | 469 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0286 | Mch-Chr11:1784827 | Mch4g0691 | Mch-Chr4:4614509 | 2.65E-237 | dispersed | |
| Mch4g0691 | Mch-Chr4:4614509 | Mch5g0268 | Mch-Chr5:1823513 | 9.94E-77 | dispersed | |
| Mch10g0943 | Mch-Chr10:6658693 | Mch4g0691 | Mch-Chr4:4614509 | 3.80E-187 | transposed | |
| Mch3g0200 | Mch-Chr3:2628131 | Mch4g0691 | Mch-Chr4:4614509 | 1.17E-176 | transposed | |
| Mch6g1342 | Mch-Chr6:11138427 | Mch4g0691 | Mch-Chr4:4614509 | 4.06E-77 | transposed | |
| Mch4g0691 | Mch-Chr4:4614509 | Mch8g0687 | Mch-Chr8:4931201 | 2.80E-210 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch4g0691 | K09843 | - | csv:101219389 | 801.971 |