Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch4g0692 | TCTCCGGCAATGGCCTTCACCAACAACGGACAGGAAGACGGGAACCAAGCCGGAAGGCACCAGGAAGTCGGCCACAAGAGCCTCTTGCAGAGCGATGCTCTGTATCAGTACATTCTGGAGACCAGCGTTTATCCGAGGGAGCCGGAATCGATGAAGGAGTTGCGAGAATTGACGGCCAAACATCCGTGGAACATCATGACGACGTCGGCAGACGAAGGACAGTTCTTAAACATGCTTTTGAAGTTAATCAACGCGAAGAAAACGATGGAGATCGGAGTTTACACTGGATACTCGCTTCTTGCTACAGCCCTAGCTCTTCCCGAAGACGGACAGATTCTGGCTATGGATATTAATAGAGAAAATTACGAGCTCGGTTTGCCGGTTATTGAGAAAGCCGGCGTCGCCCACAAGATCGAGTTCAAGGAAGGCCCTGCTCTCCCTGTTCTTGACGAGATGGTAGCAGATGGGAAGAATCATGGAAGCTACGACTTCATATTCGTGGACGCTGATAAGGACAACTACATAAACTACCACAAGAGGCTGATCGATCTGGTGAAAGTTGGAGGAGTGATCGGGTACGACAACACCCTATGGAACGGTTCGGTGGTCGCCCCACCCGACGCGCCCATGCGTAAGTACGTGAGGTATTACAGGGACTTCGTTTTGGAGCTCAACAAGGCCCTCGCTGCTGACCCTAGGATCGAGCTCTGCATGCTCCCCGTCGGCGATGGCATCACTCTCTGCCGTCGGATCAACTGA | 759 | 52.44 | SPAMAFTNNGQEDGNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGQILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDEMVADGKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIELCMLPVGDGITLCRRIN | 252 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 4641050 | 4643343 | - | MC04g0538 | Mch4g0692 | 685404 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch4g0692 | 252 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Mch4g0692 | 252 | Gene3D | Vaccinia Virus protein VP39 | 26 | 252 | IPR029063 | - | |
| Mch4g0692 | 252 | FunFam | Caffeoyl-CoA O-methyltransferase 1 | 20 | 252 | - | - | |
| Mch4g0692 | 252 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 31 | 250 | IPR029063 | - | |
| Mch4g0692 | 252 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 27 | 251 | IPR002935 | GO:0008171(InterPro) | |
| Mch4g0692 | 252 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Mch4g0692 | 252 | Pfam | O-methyltransferase | 40 | 251 | IPR002935 | GO:0008171(InterPro) | |
| Mch4g0692 | 252 | PANTHER | O-METHYLTRANSFERASE-RELATED | 24 | 251 | IPR050362 | GO:0008757(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g0488 | Mch-Chr10:3168606 | Mch4g0692 | Mch-Chr4:4641050 | 1.70E-164 | dispersed | |
| Mch9g2362 | Mch-Chr9:23564272 | Mch4g0692 | Mch-Chr4:4641050 | 4.56E-83 | transposed | |
| Mch1g1222 | Mch-Chr1:14558218 | Mch4g0692 | Mch-Chr4:4641050 | 2.36E-116 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch4g0692 | K00588 | - | csv:101205648 | 493.812 |