Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0736 TCCGCCGCAGCAGATCTCCACCAACCAAGAGAGCTTCACCTACTACCACTTTCCTCGCTCCTTCCGCCATTTCTCTTCCTCTGTTCTCTTATTTATACCCCCTCCCATTCCCCATCTTCTTCTTCAAACCCCAATTCTTCATTTCTGCAACAACAAAAAAACTCTGTTTTTGTGTGTATAATGGGCAGCATTCAGGCAGATAGAACAGTGACGGGATTTGCCGCGAGAGACCCATCTGGGTTTCTCTCTCCCTATACTTACACACTCAGAGAAACAGGGCCGGAGGATGTTTATATCAGAGTAATTTGCTGTGGGTTGTGCCATACTGACATTCATCAGGTCAAGAATGACCTCGGCATGTCCAATTATCCCATGGTTCCTGGGCACGAAGTGGTGGGGGAGGTGATGGAGATTGGGAAGAATGTGGAGAGATTCAGAGTGAAGGATATTGTGGGAGTTGGGTGCATTGTAGGATCCTGCAAAAGCTGTCTGCGCTGTGAGACTGATCGAGAGCAATATTGCAACAACAGGATCTGGACCAACAACGATGTCTACACCGATGGCAAGCCCACCCAAGGCGGCTTTGCCACCGCCATGGTCGTCGACCAAAGGTTTGTGGTGAAAATCCCAGATGGGATGGCGGCGGAGCAGGCGGCGGGGCTGCTATGCGCGGGGGTGACGGTGTACAGCCCGCTGAACCACTTTGGGCTGAAGGGGAGCGGGCTGAGGGGAGGGATTTTGGGGCTGGGCGGCGTGGGGCACATGGGGGTGAAGCTAGCCAAGGCATTGGGCCACCATGTCACAGTCATAAGCTCATCCGACAAGAAGAGACAAGAAGCCATCGACCACCTCGGTGCCGACGACTACCTCGTCAGCTCTGACCTCGGCCGGATGCAGCAGGCCGCCGACTCTCTCGATTACATCATTGACACCGTCCCGGCGCTTCACCCTCTCGAGCCTTATCTTTCTTTGCTAAAACTCGACGGGAAGTTGATCTTGCTTGGTGTCGTCAATAATCCTTTGCAGTTCGTCTCCCCCATGGTCATTCTTGGGAGGAAGACGATAATGGGGAGCTTCATAGGGAGCATGAAGGAGACGCAGGAGGTATTGGAGTTCTTCAAAGAGAAGGAACTGAGCTCGATGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATGGAGAGGTTGGAGAAGAATGATGTTAGATACAGGTTCGTGGTGGATGTTGAAGGAAGCAAGTTTTAG 1248 52.08 SAAADLHQPRELHLLPLSSLLPPFLFLCSLIYTPSHSPSSSSNPNSSFLQQQKNSVFVCIMGSIQADRTVTGFAARDPSGFLSPYTYTLRETGPEDVYIRVICCGLCHTDIHQVKNDLGMSNYPMVPGHEVVGEVMEIGKNVERFRVKDIVGVGCIVGSCKSCLRCETDREQYCNNRIWTNNDVYTDGKPTQGGFATAMVVDQRFVVKIPDGMAAEQAAGLLCAGVTVYSPLNHFGLKGSGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSDKKRQEAIDHLGADDYLVSSDLGRMQQAADSLDYIIDTVPALHPLEPYLSLLKLDGKLILLGVVNNPLQFVSPMVILGRKTIMGSFIGSMKETQEVLEFFKEKELSSMVEVVKMDYINKAMERLEKNDVRYRFVVDVEGSKF 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4997541 4999714 - MC04g0573 Mch4g0736 685448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0736 415 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 215 378 IPR036291 -
Mch4g0736 415 FunFam Cinnamyl alcohol dehydrogenase 224 380 - -
Mch4g0736 415 FunFam Putative cinnamyl alcohol dehydrogenase 6 381 410 - -
Mch4g0736 415 SUPERFAMILY GroES-like 76 241 IPR011032 -
Mch4g0736 415 CDD CAD1 71 409 IPR047109 GO:0016616(InterPro)
Mch4g0736 415 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 128 142 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Mch4g0736 415 Gene3D - 73 410 - -
Mch4g0736 415 Gene3D - 224 380 - -
Mch4g0736 415 PANTHER ALDEHYDE REDUCTASE 69 411 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Mch4g0736 415 SMART PKS_ER_names_mod 80 408 IPR020843 GO:0016491(InterPro)
Mch4g0736 415 Pfam Zinc-binding dehydrogenase 251 374 IPR013149 -
Mch4g0736 415 Pfam Alcohol dehydrogenase GroES-like domain 93 211 IPR013154 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1704 Mch-Chr2:15623953 Mch4g0736 Mch-Chr4:4997541 3.09E-130 dispersed
Mch4g0736 Mch-Chr4:4997541 Mch6g2385 Mch-Chr6:25729871 6.16E-93 dispersed
Mch10g0473 Mch-Chr10:3081271 Mch4g0736 Mch-Chr4:4997541 5.88E-216 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0736 K00083 - csv:101214622 613.609