Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0769 ATGATGTTGAGATCATTCTACCGGCCGCTGGAGCGCTGTTTTGGGCGCTGGGCCGGCGACGGCCTGCTCTGGCACTCTGAATTGAAGCCTCATGCCTCTGGCGATTACTCGATCGCCGTTGTTCAGGCCAACTCCTGCCTTGAGGATCAGAGCCAGGTGTTTACGTCTCCCTTGGCTACCTATGTTGGTGTTTATGATGGCCATGGCGGCCCCGAGGCCTCTCGCTTTGTGAATAAGCATCTCTTTCCTTATATGCACAAGTTTGCTACTGAACAAGGTGGGCTCTCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAGGATTTTCTGCGTTTGGTGAAGCGGGCTCTGCCTGCCAAGCCACAGATTGCTTCAGTTGGGTCATGCTGCCTCGTGGGAGCGATTTCGAATACGAAATTGTACGTTGCGAATCTCGGGGATTCGAGGGCTGTGCTCGGCCGGAGAGGTTCGGAGAGTAAGAGAACTCCGGTGGTTGCAGAGCGGTTGTCTACTGATCACAATGTTGGAGTTGATGAAGTTAGGAAAGAGGTTGAAGCACTGCATCCTGACGACTCCCATATTGTTGTCTATAGCCGTGGAGTTTGGAGGATAAAGGGCATAATTCAGGTTTCAAGGTCTATCGGCGACGTCTATTTGAAGAAACCCGAATTCAACCGGGATCCAATATTCCAACAGTTTGGGAACCCCGTCCCGTTGAAACGACCAGTAATGACCGCAGAACCATCGATCCTGACACGAGAGCTTAAACCCCAAGACTTGTTCCTGATCTTTGCATCAGATGGCCTCTGGGAACAACTGACTGATGAGGCTGCTGTGGAGATAGTTTTCAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGAGAGCCGCCCTCCACGAGGCAGCAAAGAAGCGGGAGATGAGATACGCAGACATAAAGAAGATCGAAAAGGGGATTCGGCGTCACTTCCATGACGACATAACTGTTATCGTCGTCTACCTCGACCACCACAGAAGCTCACCTACAGGGCGGGCGAAGAACGGCATTGCCGGGTACACGAGTGCACCCGTTGACATCTTCTCTCTAAACTCAAACTATGAGGCAGAGGAAAAACTTGGCAACAGCATGTTCTGA 1143 51.01 MMLRSFYRPLERCFGRWAGDGLLWHSELKPHASGDYSIAVVQANSCLEDQSQVFTSPLATYVGVYDGHGGPEASRFVNKHLFPYMHKFATEQGGLSEDVIKKAFNATEEDFLRLVKRALPAKPQIASVGSCCLVGAISNTKLYVANLGDSRAVLGRRGSESKRTPVVAERLSTDHNVGVDEVRKEVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVRAALHEAAKKREMRYADIKKIEKGIRRHFHDDITVIVVYLDHHRSSPTGRAKNGIAGYTSAPVDIFSLNSNYEAEEKLGNSMF 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5272803 5275605 - MC04g0595 Mch4g0769 685481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0769 380 FunFam Probable protein phosphatase 2C 42 26 345 - -
Mch4g0769 380 Gene3D - 25 345 IPR036457 -
Mch4g0769 380 Pfam Protein phosphatase 2C 59 306 IPR001932 -
Mch4g0769 380 SUPERFAMILY PP2C-like 43 339 IPR036457 -
Mch4g0769 380 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Mch4g0769 380 CDD PP2Cc 42 337 IPR001932 -
Mch4g0769 380 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169(InterPro)
Mch4g0769 380 PANTHER PROTEIN PHOSPHATASE 30 336 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch4g0769 380 SMART PP2C_4 25 335 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0769 Mch-Chr4:5272803 Mch5g1439 Mch-Chr5:15484369 2.52E-141 dispersed
Mch4g0769 Mch-Chr4:5272803 Mch2g0384 Mch-Chr2:2843424 1.59E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0769 - - - 0.0