Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0797 ATGTTCAGATCTCTCAAATCTCTCAGTTTCCTTCTCGCTCTTGCTCTAGAAAATTCTGAGGTTGATCCACCGTACCGGCGGCGAAATTCCATGCGGGCACAGCATCCTCACCCACTGAAGCCGGGTGTCGCCGCACCCGATGAGGAGAACGAACCACTCCGCTCCTCCCACGCCGGAATGAACGTCCCTTTAGGCGCCGGAATTCGGAAGAAGGGTACCGGAGTCCGGCCATGGCTGCTCTTGGACTCGACCGGCGGAGCTCAGGTGGTGGAGGCCGGAAAACATGCGATCATGCGGCGGACCGGTCTGCCGGCGCGGGACCTCCGGATCCTTGATCCAATGCTCTCGTATCCGTCGACGATTCTTGGCCGTGAGAAAGCGATTGTGATCAATCTGGAGCACATCAAAGCCATTATCACCGCTCAAGATGTCTTCGTGTTGAATGCTAGGGATCCGTCCGTGACCCCCTTTGTAGAGGAGCTTCAGAGGCGGTTGCTGCGACACCACCAAGCCACTAAGGCCGCTCAGGAGGGCAATGGCGATGATTCTAATTGGAGAAATCTGTATGACTTGGAAGAGCCACGATCAAGGGCTCAAAGTCCTCGTAATTCGTACCAGGGATTTCCACAGGCTGAAGAGGAGGAAAGCGGGAAACAAGGTCTTGAAAACCGGGAGGGATTGAAGGTTCTTCCATTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCTTGCAGTTGCTTAGAAAGTGAAGCAGATACATTGGAGCTAGAAGCTCACCCAGCTTTAGATAAGCTGACTTCTAAGATCAGTACTCTCAATTTGGAAAGGGTGCGTCAGATCAAAAGTCGATTGGTTGCTATAACTGGACGGGTTCAAAAGGTGCGGGACGAATTAGAGCACTTGCTAGATGACGATGAGGATATGGCTGAGATGTACCTAACAGAGAAGATTGTTCAGCAACAGCTTGAGAACTCTTCCACTTCTTCAATTCCTGAGAGAGATGACATGGAAGATGAAGTTCAGCAAGTAGGCAAAGATGACAGGCACGAGATTCTTCTTATAATTCCTGCTGAAATATCATTGGACGGTGGTGGGAACTATGAAGGCAATATGGATGCCTCCCAGGATCATTTGTTTGGTTCCTCAAATGTTGGCAGGGACAGCCATGGGACCCGGACCAGTACTACCCATAGCGCTATAAGCAAACAGCTCGATGTGGAGGAACTCGAGATGCTGTTGGAGGCATACTTTGTGCAAATTGATGGTACACTGAACAAACTTTCCACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTGGATGACAAACAGAACCATCTTCTACAAATGGGAGTAATGTTGACAACGGCAACCCTCGTTGTGAGCGCCTTCGTCGTGGTGGCAGGTATCTTCGGCATGAACATCCATATCGAGCTGTTCGAACCAGAAAAAGCAGGTATGCCAGAGTTCCTGTGGACTGTTGGTGGTGGCGCTACAGGAACCATCTTCTTGTACGTCATTGCCATTACCTGGTGCAAGCACAAACGCTTGCTTGAGTAG 1578 50.25 MFRSLKSLSFLLALALENSEVDPPYRRRNSMRAQHPHPLKPGVAAPDEENEPLRSSHAGMNVPLGAGIRKKGTGVRPWLLLDSTGGAQVVEAGKHAIMRRTGLPARDLRILDPMLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRLLRHHQATKAAQEGNGDDSNWRNLYDLEEPRSRAQSPRNSYQGFPQAEEEESGKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKIVQQQLENSSTSSIPERDDMEDEVQQVGKDDRHEILLIIPAEISLDGGGNYEGNMDASQDHLFGSSNVGRDSHGTRTSTTHSAISKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFLWTVGGGATGTIFLYVIAITWCKHKRLLE 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5514716 5522478 - MC04g0618 Mch4g0797 685509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0797 525 MobiDBLite consensus disorder prediction 193 220 - -
Mch4g0797 525 MobiDBLite consensus disorder prediction 24 62 - -
Mch4g0797 525 CDD Mrs2_Mfm1p-like 78 523 IPR039204 -
Mch4g0797 525 Gene3D Magnesium transport protein CorA, transmembrane region 155 453 - -
Mch4g0797 525 Gene3D - 67 149 - -
Mch4g0797 525 FunFam Magnesium transporter MRS2-1 66 149 - -
Mch4g0797 525 Coils Coil 238 258 - -
Mch4g0797 525 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 64 523 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Mch4g0797 525 Pfam Magnesium transporter MRS2-like 228 321 - -
Mch4g0797 525 Pfam Magnesium transporter MRS2-like 403 448 - -
Mch4g0797 525 Pfam Magnesium transporter MRS2-like 83 170 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0797 Mch-Chr4:5514716 Mch8g1060 Mch-Chr8:7453566 1.44E-103 dispersed
Mch4g0797 Mch-Chr4:5514716 Mch7g1013 Mch-Chr7:14312521 5.48E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0797 - - - 0.0