Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g0853 ATGTCTGATTACACCAATTGCCATGGTCGCAAAAATGGACACGTAAAACATTGCCAGCCTTTCTGGGGCGTACGCTTATTACAACTCAAAATCCAATTCTATCTTCCCATGGCGATTTCTGGGTTTGTCGTTAAGCCAGCAAATGTTTCTCACTGTATTCCAATTGGGTATATTGGCTTCATGAGTTTAGGCACTATGTTGGACCCGGTTAGTTGCTGCCAAAGCTCCCAGTCCCAGATTTATAGTGTAGTTAAACAGAAGAATCCTATGAGGGCCTACTCTCATATTATTCATCAACTTTGTGGACCTTCCTTCAATTTACATAACTTACAGTCGAAGAAAGTGGCTGTTCCATCATTCACCATAAATTGCTTGAGGAATGGTTATTCTTTAGTACCTGTACTTTTCCACAACAGTTCTACTACATTAGCATTCAGCTCGTCTAAAGTAGTTGGCCGGGATGGATTCAATTGGTCTAATCATAGGCCTAAACAGAGGGAAAGATTAAGAACATGTGCGGCCGTTGATGTTGCAGCTGCTGTTGATGTCATCAATGATCTAGGATTGGATACATTGACATTCCTAGCTGTGACAGTCATAGTTGTTCCTCTATTTAGGAGAGTTAAAGCTAGCCCTATACTTGGTTTCTTCTTTGCTGGGATTGTACTTAATCAATTTGGTGTGATTAGAAATCTTATAGATGTTAAAGTTTTGTCCGAATGGGGAATACTTTTCCTGCTATTTGAGATGGGTCTAGAGCTTTCATTTGCCCGTTTAAAGGCTCTTGCAAGATTTGCTTTCGGCATGGGTTTGACACAGGTCATATTATCTACTATCGCTTTCACAGCATTTGAACTTCCCCCTAATGGGGCTATTGGAACAAGAATTTTGGAGTTCCTTTTTCATGCCAGATCTGACTTGGTTAACATCAGAAGCATTGATGAAGCTATTGTGATTGGTGCTGCCCTTTCTCTTTCTTCTTCAGCTTTTGTTTTACAGCTTCTTGCAGAGAAAGGTGAGCTTGCAACAAGGTTTGGCTCGGCAACTCTAGGGATACTTCTTTTTCAGGATATTGCTGTTGTCCCTCTCCTGGTCATACTTCCGGTTCTTGAGAGCCAGAATTTGGGCACGCAAAGTATCTGGCCAATGCTTGCACAAGAAAGTTTGAAGGCCTTAGGTGGACTGGGTCTGCTCTCCCTTGGAGGGAAGTTAATACTTAGGCGAGTTTTTGAGGTAGTTGCGGAAGCAAGAAGCTCAGAGGCTTTTGTGGCACTTTGCCTGCTGACAGTTGCTGGCACTTCACTAATCACTCAGAAATTGGGCTTTAGTGATACGCTGGGAGCATTTTTGGCTGGAGCAATATTAGCAGAAACTAATTTCCGGACACAGATTGAAGCAGATATTAGGCCATTTAGGGGCTTGCTCCTTGGGTTATTCTTTGTTACCACGGGGACTTCCATTGATACGCAGCTCCTGTTCCGAGAATGGCCGAATGTTCTTGCACTTTTGGCAGGTTTAATAGCAATCAAGACCCTTATAATAACAGCAATAGGTCCCCGTGTGGGACTCACTACTCAAGAAAGTGTAAGAATAGGATTACTTCTATCTCAAGGAGGCGAGTTCGGGTTTGTAGTGTTTTCTCTAGCTAACAGGCAGCTTGGAGTGCTACCACTTGAGTTAAACAAGCTGCTCATCATTATTGTTGTCTTGTCAATGGCTCTAACCCCCTTGCTTAATGAAGCTGGACGAAAGGCATCTGAATTCATTAGCGAAAAGTACGAGACAGAGGACAAAGCTGCAGAGACGGTAAATTTTGACGCTAGCGAACCTGTTGTCATTGTTGGATTTGGACAAATGGGTCAGGTCCTGGCAAATTTCTTATCTGCACCTTTGGTATCTGGGGGAGATGGCGACACTCCTGGATGGCCATATGTGGCTTTTGACATCGATCTTTCTGTAGTGAAGACATCTAGAAAACTTGGTTTTCCTGTTCTCTATGGAGATGGATCTCGACCAGCAGTTTTGCAGTCCGCTGGAATCTCTTCTCCAAAAGCTGTCATGGTTATGTACACAGAGAAGAAGACGACAATTGAGGCTGTTCAAAGGCTCCGGCTTGCTTTCCCAGCAATCCCGATTTACGGCCGTGCTAAGGATGTGGTGCATCTATTAGATTTAAAGAATGCTGGTGCTACAGACGCTATCCTCGAAGATGCGGAGACTAGTTTGCAACTCGGGTCAAAGCTTTTGAAAGGGCTCGGCGTCATGTCTGACCAAGTGTCTTTCATAAGTCAGATTGTTCGGGACTCTATGGAAATACAAGCTCAGGATGCACTCGACAAATCTGACGAGCAAGAGTTAGAAATTATGAAGCCGATGCAGATACGCGTCAAGGACTCACTCGAGTCGGGATTACCTAGTTTATCAACGTCCCCCGAGGACAACCTGTCGAGGCTGAACCAGGAAGACAACTCTCTGATCTTAAATGGCAAAGAAATGGAGCAAAGAAAGCAAGATGCTGTTTTCCAGAAGGCTGAAGATTTAGATGGAAAGGGAGTTCTATACTGTGAACTTGATTCAGAGAACAACTTTTTAGATCAAAATGTGGCAGAGCCACCAACCCCTTTCATAGCAGCCACTGACGAGGTTTAG 2649 43.83 MSDYTNCHGRKNGHVKHCQPFWGVRLLQLKIQFYLPMAISGFVVKPANVSHCIPIGYIGFMSLGTMLDPVSCCQSSQSQIYSVVKQKNPMRAYSHIIHQLCGPSFNLHNLQSKKVAVPSFTINCLRNGYSLVPVLFHNSSTTLAFSSSKVVGRDGFNWSNHRPKQRERLRTCAAVDVAAAVDVINDLGLDTLTFLAVTVIVVPLFRRVKASPILGFFFAGIVLNQFGVIRNLIDVKVLSEWGILFLLFEMGLELSFARLKALARFAFGMGLTQVILSTIAFTAFELPPNGAIGTRILEFLFHARSDLVNIRSIDEAIVIGAALSLSSSAFVLQLLAEKGELATRFGSATLGILLFQDIAVVPLLVILPVLESQNLGTQSIWPMLAQESLKALGGLGLLSLGGKLILRRVFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDTQLLFREWPNVLALLAGLIAIKTLIITAIGPRVGLTTQESVRIGLLLSQGGEFGFVVFSLANRQLGVLPLELNKLLIIIVVLSMALTPLLNEAGRKASEFISEKYETEDKAAETVNFDASEPVVIVGFGQMGQVLANFLSAPLVSGGDGDTPGWPYVAFDIDLSVVKTSRKLGFPVLYGDGSRPAVLQSAGISSPKAVMVMYTEKKTTIEAVQRLRLAFPAIPIYGRAKDVVHLLDLKNAGATDAILEDAETSLQLGSKLLKGLGVMSDQVSFISQIVRDSMEIQAQDALDKSDEQELEIMKPMQIRVKDSLESGLPSLSTSPEDNLSRLNQEDNSLILNGKEMEQRKQDAVFQKAEDLDGKGVLYCELDSENNFLDQNVAEPPTPFIAATDEV 882
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6052799 6065069 - MC04g0656 Mch4g0853 685565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g0853 882 FunFam K(+) efflux antiporter 3, chloroplastic 186 586 - -
Mch4g0853 882 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 91 820 - GO:0009507(PANTHER)|GO:0016020(PANTHER)
Mch4g0853 882 ProSiteProfiles RCK N-terminal domain profile. 610 742 IPR003148 GO:0006813(InterPro)
Mch4g0853 882 Pfam Sodium/hydrogen exchanger family 197 579 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Mch4g0853 882 FunFam Glutathione-regulated potassium-efflux system protein KefB 608 780 - -
Mch4g0853 882 Pfam TrkA-N domain 611 734 IPR003148 GO:0006813(InterPro)
Mch4g0853 882 Coils Coil 767 787 - -
Mch4g0853 882 Gene3D - 186 587 IPR038770 -
Mch4g0853 882 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 609 753 IPR036291 -
Mch4g0853 882 Gene3D - 610 780 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0853 Mch-Chr4:6052799 Mch5g0373 Mch-Chr5:2533671 8.05E-101 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g0853 K03455 - csv:101209266 1310.82