Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1104 CTGGAGAAAATGAGGACTGGAAAGAGGAAGCTGAGGTTAAGCAAGATCTATTCATTTGCTTGTGGAAGAACATCATTGAGAGATGAAGATCAATCACAGATTGGGAGGCCGGGGTTCTCCCGAGTCGTTTTCTGCAATGATCCGGATTGTTTGGAGGCAGGAATGCGTAATTATGTTGACAACTCCATCAGGTCTACGAAGTACACACCTATCACTTTTGTGCCCAAGTCCCTGTTTGAGCAGTTCAGGAGGGTGGCTAATTTTTACTTCTTAATTGCTGGTATTCTAGCCTTCACTCCTCTTGCTCCTTATACTGCTGTCAGTGCAATCATTCCTCTCATTGCTGTTATTATCGCAACAATGGTTAAAGAAGGTATTGAAGATTGGCGGAGGAAGGCACAGGATATTGAGGTGAATAATAGAAAGGTTAAGGTCCATCAAAGCAATGGAGTCTTCGATTATACTGAATGGAAAACTTTGAGGGTCGGAGATATAGTGAAGGTTGAAAAGGATCAATACTTTCCAGCCGACCTTCTTTTGGTTTCATCCTGCTATGAGGATGGAATCTGTTATGTAGAAACGATGAACCTTGATGGGGAAACAAATCTAAAGGTAAAGCAAGCACTGGAAGTAACTGCATTTGCAAATGAGGATTCTAACTTCCGTGACTTTAAGGCTACAATAAAATGTGAAGACCCAAATGCAAATCTTTATACCTTTGTTGGAAGCATGGACTTTGAAGAGCAACAATATCCACTATCTCCACAAAATCTTCTCCTAAGAGACTCTAAGCTCCGAAACACAGAGTATATATATGGAGCTGTTGTCTTTACGGGTCAAGATTCAAAGGTTATTCAAAATTCTACTGATCCACCTTCTAAGAGAAGCAAAGTTGAGAAGAAGATGGATAAAATAATATACCTGTTGTTGAGCATTCTTTTCTTGCTGGCATTTATTGGATCTATAGTCTTCGGCGTCATGACTAAAGATGATTTGAAAAATGGGAGGATGAAGAGATGGTATCTTAGACCAGATGAATCTACTATTTACTTTGACCCCAAAAATGCACCAGCTGCTGCAATTTTTCACTTTCTGACAGCGCTAATGTTGTATAACTACTTTATCCCTATATCCTTGTATGTGTCTATTGAAATTGTCAAAGTTCTTCAGAGCATCTTCATCAATCAAGACATTCACATGTACTATGAAGAAGCTGACAAACCGGCACATGCTCGCACCTCCAATTTGAATGAGGAACTTGGTCAAGTCGACACTATACTCTCCGACAAGACTGGAACTTTGACCTGTAACTCAATGGAGTTTATCAAGTGTTCTGTGTCTGGAACAGCTTATGGCAGCGGTGTTACTGAAACTGAGAGAGCTGTGGATATCAGAAATGGTATGCCAATGCTTAATGGCAATGGAAATGGAAATATCTATAGGCACAATGAGGATGCTAAAGATTCAAGTCCCTCCGTCAAAGGCTTTAATTTTAAGGACAAAAGAATTATGAATGGAAACTGGGTTAATGAACCTCATGCAGATGTCATCCAGAAGTTCTTTCGCCTCCTTGCAACTTGTCATACTGCTATTCCTGACGTGGATGAAAATACAGGCAATGTTTCGTACGAAGCTGAATCGCCAGATGAAGCAGCATTTGTAATTGCTGCCAGAGAAGTTGGTTTTGAATTCTACCAAAGGACACAGACAAGTATATCATTTCGTGAACTGGATCCTAGGTCTGGAAGGAAAGTTGAAAGGTCGTACAAGCTTTTAAATGTTTTGGAGTTTAATAGTGCCCGGAAGAGAATGTCAGTCATAGTAAGAAATGAAGAGGGTAAAGTACTATTACTATGCAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGAATGCTAGCAGATTTGAAGAGAAAACGAAGGAACATATCAATGAGTATGCAGATGCAGGGCTAAGGACCTTGGTGCTCGCTTATCGTGAACTTGACGAGGAGGAATACAAGGAATTTGATAGGAAATTCTATGAAGCAAAGAATTCAGTTAGTGCAGAGAGGGAATCATTGATTGATAAAGTAACAGATCGCGTCGAAAGGGATTTAATTCTTCTTGGTTCCACGGCAGTTGAGGACAAGCTTCAAAATGGGGTCCCTGAATGCATAGACAAGCTTGCTCAAGCTGGGATTAAGATCTGGGTTTTGACCGGGGACAAGATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAACAGATTATTATAACTCTGGAAACACCAGAAATTCAAGCCTTAGAAAGGACGGGAGAGAAGGATATGATTACTAAGGCATCAAAAGAAAGTGTTGTCCACAAGATCACTCGGGCGAGGTCTCAGCTCACTGCATCAAGTGGAAGCTCTGAGGCTTATGCCTTGATAATTGATGGGAAATCACTTACTTATGCTTTAGAGGATGATGTGAAGAATGTATTCCTTGAGCTTGCGATTGGATGTGCATCTGTTATTTGCTGTCGCTCATCTCCAAAACAAAAGGCTATGGTCACTAAGTTGGTTAAACTTACAACGGGGAAAACAACATTAGCAATTGGTGACGGCGCAAATGATGTTGGAATGCTTCAAGAAGCAGATATCGGAGTTGGAATCAGTGGTGCCGAAGGAATGCAGGCATTCATGTCGAGTGACATTGCTATTGCCCAGTTCAGATATTTGGAGCGCCTACTACTCGTACATGGACATTGGTGTTACAGAAGATTATCTTCAATGATATGCTACTTTTTCTACAAGAATTTCACATTTGGTTTTACACTTTTCTTATATGAGGCATACACTTCATTCTCTGCACAACCTGCATATAACGACTGGTTTATGTCACTCTACAATGTTGTATTCTCCGCATTGCCAGTTGTGGCTCTCGGGGTGTTTGACCAGGATGTGTCTGCAAGATATTGCCTCAAGTTTCCTCTGTTGTACCAACAAGGTGTGCAGAATGTCCTCTTTAGCTGGCTCCGGATTGTCAGTTGGATGTTTAATGGTCTGTGCAGTGCGTTGATCATTTTCTTTTTCTGCACAAATGCAATGCATCACCAAGCATTTAACCCTGACGGGAAAACCGTGGGGAGAGATATTTTAGGAGCAACGATGCTGTCGTGTGTTGTTTGGGTTGTCAACTTGCAGATGGCACTCTCTGTTAGCTACTTCACCTTGTTACAACATATTTTCATCTGGGCTTCAATCTTTATCTGGTACCTTTTTCTGATGATATACGGATCCTTTCCTGCCAGCATCTCGACAAATGCATATCGCGTTTTCCTCGAAGCCCTTGCCCCCGCCGGGTCTTATTGGGTTCTGCTGATCTTCGTTGTGATCGCTACTCTCGTTCCATTCTTTGTATACTCAGCATTACAGATGAATTTCTTCCCTATGTACCATGAAAAAATTCAGTGGATAAGGCACGACGGTCAGGGTCAGATAGACGATCCCGAGTTTGTCAATATGGTCAGGCAACGCTCGTTGAGACCGACAACTGTGGGGTTTTCTGCACGTTTGGCAGCCAAACTAAGAAGAGAAAAATCATAG 3594 41.62 LEKMRTGKRKLRLSKIYSFACGRTSLRDEDQSQIGRPGFSRVVFCNDPDCLEAGMRNYVDNSIRSTKYTPITFVPKSLFEQFRRVANFYFLIAGILAFTPLAPYTAVSAIIPLIAVIIATMVKEGIEDWRRKAQDIEVNNRKVKVHQSNGVFDYTEWKTLRVGDIVKVEKDQYFPADLLLVSSCYEDGICYVETMNLDGETNLKVKQALEVTAFANEDSNFRDFKATIKCEDPNANLYTFVGSMDFEEQQYPLSPQNLLLRDSKLRNTEYIYGAVVFTGQDSKVIQNSTDPPSKRSKVEKKMDKIIYLLLSILFLLAFIGSIVFGVMTKDDLKNGRMKRWYLRPDESTIYFDPKNAPAAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIHMYYEEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVSGTAYGSGVTETERAVDIRNGMPMLNGNGNGNIYRHNEDAKDSSPSVKGFNFKDKRIMNGNWVNEPHADVIQKFFRLLATCHTAIPDVDENTGNVSYEAESPDEAAFVIAAREVGFEFYQRTQTSISFRELDPRSGRKVERSYKLLNVLEFNSARKRMSVIVRNEEGKVLLLCKGADSVMFERLAKNASRFEEKTKEHINEYADAGLRTLVLAYRELDEEEYKEFDRKFYEAKNSVSAERESLIDKVTDRVERDLILLGSTAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIITLETPEIQALERTGEKDMITKASKESVVHKITRARSQLTASSGSSEAYALIIDGKSLTYALEDDVKNVFLELAIGCASVICCRSSPKQKAMVTKLVKLTTGKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAFMSSDIAIAQFRYLERLLLVHGHWCYRRLSSMICYFFYKNFTFGFTLFLYEAYTSFSAQPAYNDWFMSLYNVVFSALPVVALGVFDQDVSARYCLKFPLLYQQGVQNVLFSWLRIVSWMFNGLCSALIIFFFCTNAMHHQAFNPDGKTVGRDILGATMLSCVVWVVNLQMALSVSYFTLLQHIFIWASIFIWYLFLMIYGSFPASISTNAYRVFLEALAPAGSYWVLLIFVVIATLVPFFVYSALQMNFFPMYHEKIQWIRHDGQGQIDDPEFVNMVRQRSLRPTTVGFSARLAAKLRREKS 1197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10847867 10856280 + MC04g0792 Mch4g1104 685816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1104 1197 FunFam Phospholipid-transporting ATPase 704 908 - -
Mch4g1104 1197 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 29 1154 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Mch4g1104 1197 SFLD C1.7: P-type atpase like 409 919 - -
Mch4g1104 1197 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 1145 IPR023298 -
Mch4g1104 1197 CDD P-type_ATPase_APLT_Dnf-like 60 1028 - -
Mch4g1104 1197 FunFam Phospholipid-transporting ATPase 546 704 - -
Mch4g1104 1197 PRINTS P-type cation-transporting ATPase superfamily signature 427 441 - -
Mch4g1104 1197 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Mch4g1104 1197 SUPERFAMILY Calcium ATPase, transduction domain A 143 286 IPR008250 -
Mch4g1104 1197 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 503 676 IPR023299 GO:0000166(InterPro)
Mch4g1104 1197 SUPERFAMILY HAD-like 422 923 IPR036412 -
Mch4g1104 1197 Gene3D - 700 908 IPR023214 -
Mch4g1104 1197 Pfam Cation transport ATPase (P-type) 526 630 - -
Mch4g1104 1197 Gene3D - 555 679 IPR023299 GO:0000166(InterPro)
Mch4g1104 1197 Pfam Phospholipid-translocating ATPase N-terminal 43 109 IPR032631 -
Mch4g1104 1197 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Mch4g1104 1197 Pfam Phospholipid-translocating P-type ATPase C-terminal 897 1146 IPR032630 -
Mch4g1104 1197 NCBIfam phospholipid-translocating P-type ATPase 58 1153 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Mch4g1104 1197 Gene3D - 115 289 - -
Mch4g1104 1197 NCBIfam HAD-IC family P-type ATPase 834 952 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch4g1104 1197 SFLD p-type atpase 409 919 IPR044492 -
Mch4g1104 1197 FunFam Phospholipid-transporting ATPase 119 289 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1659 Mch-Chr3:18321366 Mch4g1104 Mch-Chr4:10847867 0 dispersed
Mch4g1104 Mch-Chr4:10847867 Mch9g0241 Mch-Chr9:1822816 0 dispersed
Mch4g1104 Mch-Chr4:10847867 Mch9g2015 Mch-Chr9:21431339 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1104 K01530 - csv:101205800 2229.14