Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch4g1111 | ATGAAGCTCAGTATTGTTGTTTTGTGGATCGTAGAGATCATCTCCATCCATGCAATTGGAGTTGTTTCCAAAACCAATGCCCCCGATGTTTCTGCACTGAATGTGATGTACACTAGTCTAAATTCACCTTCACAACTATCGGGTTGGAAATCGAGTGGGGGTGACCCATGTGGCGATTCTTGGGAAGGGATCAAATGCTCAGGATCATCCGTCACTGAAATAAGTTTGTCGGACTATGGACTGAGTGGATCAATGGGTTACCAGCTCTCGAATTTGGCATCCGTCACCAGCTTTGATTTGAGCAAGAACAATCTCAACGGCGAAATCCCGTATCAGCTTCCTCCTAATTGTGTTAACATCGATCTCTCTGAAAACAGCTTCACTGGTAGTGTGCCTTATTCAATTTCTCAGATGTCTGATCTTGAAACTTTAAATCTTGGACATAACAAGCTCAATAACCAATTGAGTGACATGTTTAGCAAGCTTTCTAAGCTCAAAAGGATGGATCTGTCATACAACTCACTCTCAGGAAACTTGCCTCTAAGTTTTAAGAAGCTTTCAAGCCTCAGCACACTGCACATACAGGAAAATAAATTTACAGGTTCAATCAATGTTCTTGCAGACCTTCCACTTGATGATTTAGATGTTTCAAACAACAAATTCACTGGCTGGGTTCCTGATAGCCTTGAGGACATAAATAGTTTGCAGACTGTAGGAAATTCTTGGTCGTCCGGACCAGCTCCTCCTCCTCCACCAGGATCAGCGTCCAATCCAAACAAAAACTCGGAGAAGAAGGAATCCGGCGGCGGCCACGGCGGAGTCAGCGGCATAGCCATGGCCGGAATAGCAATGGGAGTTCTTGCCGTACTTGCCATTGTTCTGGCCCTCTTCTCCAGAAGGCGATCGGCCCCTCCTTCATCCCATTATCTGGACGACGACGCCAGCACCCACCACAGATCCTTCACTCCACTCGCCTCTCAAGAACTCTCCAAAGACACAAAATCCGTCAACTCAGACGCTTCTCTGGACATCAAGGCCCTCCAGAAATCTTCCAGCAATCGTCTGCAGTCCTTCAGCGACACCCAGTTCGCCACCCGCCTCAACTCCCGCCGCAGCACCTCCGTTCGCGCTGCCGCCGTCGCCCACTCCCTGCACGATTTGCAGACCGCTACTGCCGACTTCGCCACTGCTCGCCTTCTTGGGGAGGGCACCATTGGACGTGTTTACAAGGCTAAGTATGCGGATGGCAAGGTTCTAGCTGTGAAGAAGATAGATTCGTCGGTTTTCCACGGGAGGAGATCCGAGGAATTCTCTGAAGTTGTTGCTAACATCTCCAAGCTTCACCACACCAACATCACCGAAGTCGTTGGGTTCTGTTCGGAACAGGGACACCACATGTTGATTTATGAATATTTCGTGAACGGTTCTCTTCATGGGTTTCTACATATGTCTGATGATTTCAGTAAACCTCTCACATGGAACACCAGAGTCAGGATTGCTCTGGGCACCGCACGAGCACTCGAGTACCTTCATGAGGTTTGCTTACCCTCCATAATTCACATGAATATCAAGTCTTCTAATATATTGCTTGATGCGGAGCTCAATCCTCGCCTCTCGGACTATGGTTTGGCAACTTTTTATAAGAATAGAAGCGCAAACCCGGGAGGTGGATATGATGCTCCGGAACGCTTAAAGGGTTCAAGCTACACAATCAAGACTGACACTTACAGTTTGGGAGTGGTGATGTTGGAGTTATTGACCGGCCGGATGCCTTACGACTCTGGTAAGCCGAAGGTGGAACAATGTCTAGTCCGGTGGGCCAGCCCACAACTCCACGACATCGACGCATTGGAAAAAATGGTGGACCCCGCATTGCGTGGGTTGTATCCCCCAAAGTCAGTTTCAAGGTTCGCAGATATTATAGCCCTTTGTGTCCAATCAGAGCCGGAGTTTCGGCCTCCAATGTCGGAGGTGGTTCAAGCCTTGGTAACGCTGGTCCAACGGTCCAGTATGAATGTCAGAGATGACCTTGGAACCTCTCGACGAATGGATGATTACGACTACTAA | 2067 | 48.48 | MKLSIVVLWIVEIISIHAIGVVSKTNAPDVSALNVMYTSLNSPSQLSGWKSSGGDPCGDSWEGIKCSGSSVTEISLSDYGLSGSMGYQLSNLASVTSFDLSKNNLNGEIPYQLPPNCVNIDLSENSFTGSVPYSISQMSDLETLNLGHNKLNNQLSDMFSKLSKLKRMDLSYNSLSGNLPLSFKKLSSLSTLHIQENKFTGSINVLADLPLDDLDVSNNKFTGWVPDSLEDINSLQTVGNSWSSGPAPPPPPGSASNPNKNSEKKESGGGHGGVSGIAMAGIAMGVLAVLAIVLALFSRRRSAPPSSHYLDDDASTHHRSFTPLASQELSKDTKSVNSDASLDIKALQKSSSNRLQSFSDTQFATRLNSRRSTSVRAAAVAHSLHDLQTATADFATARLLGEGTIGRVYKAKYADGKVLAVKKIDSSVFHGRRSEEFSEVVANISKLHHTNITEVVGFCSEQGHHMLIYEYFVNGSLHGFLHMSDDFSKPLTWNTRVRIALGTARALEYLHEVCLPSIIHMNIKSSNILLDAELNPRLSDYGLATFYKNRSANPGGGYDAPERLKGSSYTIKTDTYSLGVVMLELLTGRMPYDSGKPKVEQCLVRWASPQLHDIDALEKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSSMNVRDDLGTSRRMDDYDY | 688 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 11072431 | 11078563 | + | MC04g0797 | Mch4g1111 | 685823 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch4g1111 | 688 | Gene3D | Transferase(Phosphotransferase) domain 1 | 472 | 676 | - | - | |
Mch4g1111 | 688 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 26 | 253 | - | - | |
Mch4g1111 | 688 | SUPERFAMILY | L domain-like | 27 | 237 | - | - | |
Mch4g1111 | 688 | SUPERFAMILY | Protein kinase-like (PK-like) | 372 | 662 | IPR011009 | - | |
Mch4g1111 | 688 | ProSiteProfiles | Protein kinase domain profile. | 394 | 665 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch4g1111 | 688 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 359 | 471 | - | - | |
Mch4g1111 | 688 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 472 | 676 | - | - | |
Mch4g1111 | 688 | Gene3D | Phosphorylase Kinase; domain 1 | 354 | 471 | - | - | |
Mch4g1111 | 688 | MobiDBLite | consensus disorder prediction | 236 | 272 | - | - | |
Mch4g1111 | 688 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 157 | 668 | IPR046959 | - | |
Mch4g1111 | 688 | Gene3D | Ribonuclease Inhibitor | 26 | 259 | IPR032675 | - | |
Mch4g1111 | 688 | Pfam | Protein kinase domain | 396 | 660 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch4g1111 | 688 | Pfam | Leucine Rich Repeat | 164 | 186 | IPR001611 | GO:0005515(InterPro) | |
Mch4g1111 | 688 | Pfam | Leucine Rich Repeat | 212 | 230 | IPR001611 | GO:0005515(InterPro) | |
Mch4g1111 | 688 | Pfam | Leucine Rich Repeat | 141 | 162 | IPR001611 | GO:0005515(InterPro) | |
Mch4g1111 | 688 | Coils | Coil | 148 | 168 | - | - | |
Mch4g1111 | 688 | Pfam | Leucine rich repeat N-terminal domain | 27 | 67 | IPR013210 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch4g1111 | Mch-Chr4:11072431 | Mch9g0166 | Mch-Chr9:1268020 | 2.63E-167 | dispersed | |
Mch4g1111 | Mch-Chr4:11072431 | Mch8g1013 | Mch-Chr8:7183135 | 4.78E-184 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77328 | PF00069 | Pkinase | 4.90E-41 | CL0016 | Mch | PK |
Pathway information
