Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1154 ATGGCTTCCTCTACTGCCCAGATCCATGGCCTCGGAGCTCCGTCCTTCGCTGCGGCCTCCATGAGAAAGCCTAACCGCGTCTCTTCACGGACTCTGTTCTTCGGCAGTAAACTTGGCAATTCTTCTGGTTTTTCTAGCGCGACATTTTTGAAGCTGAGGAGCGATATTAGTCGTAGGAGTTCGAGTGTCAGGCCATTGAGGGTCGTCAATGAGAAAGTTGTGGGAATCGACCTCGGAACTACCAACTCCGCAGTTGCAGCCATGGAAGGTGGGAAGCCAACTATTGTTACTAATGCTGAAGGGCAGAGGACAACACCATCGGTGGTGGCTTACACAAAGAACGGAGACAGGCTTGTGGGACAAATTGCCAAGCGACAGGCAGTCGTAAACCCTGAGAATACTTTCTTTTCAGTGAAGAGGTTTATTGGTAGGAAGATGTCCGAGGTGGATGAGGAGTCCAAGCAGGTCTCCTACAGGGTAGTGCGCGATGAGAATGGAAATGTGAAGCTGGAATGCCCGGCGATTGGAAAGCAATTTGCCGCGGAAGAAATTTCAGCTCAGGTGTTAAGAAAGCTGGTGGACGATGCTTCGAAGTTTCTAAATGATAAAGTAACAAAGGCTGTCGTGACCGTGCCTGCCTACTTCAATGATTCTCAAAGAACGGCCACAAAGGATGCTGGTCGTATTGCTGGTCTCGAAGTTTTGCGTATTATCAATGAACCCACTGCTGCTTCATTAGCTTATGGATTTGAAAAGAAGAGCAACGAAACCATCTTGGTGTTTGATCTTGGTGGGGGTACTTTTGATGTCTCAGTGCTTGAGGTGGGTGATGGAGTGTTTGAAGTGCTTTCTACGTCGGGAGATACTCATTTGGGGGGTGATGACTTTGATAAGAGAATTGTTGACTGGCTCGCTGCAAATTTCAAGAGGGATGAAGGCATAGATTTGCTGAAAGATAAACAGGCTCTTCAGCGGCTCACTGAGACAGCTGAGAAAGCCAAAATGGAGCTGTCATCTTTGACCCAGGCTAACATTAGTCTGCCTTTCATCACTGCCACGGCAGATGGCCCTAAGCACATTGAGACCACTATTACCAGGGCCAAGTTTGAAGAATTGTGCTCAGATCTTCTTGATAGGCTCAAGACTCCAGTTGAAAATTCCTTGAGGGATGCAAAACTCTCCTTTAAAGATATTGACGAGGTTATCCTTGTGGGTGGATCAACACGTATTCCAGCTGTTCAGGAGCTTGTTAAGAAGATGACTGGGAAGGAACCAAATGTTACCGTCAATCCTGATGAAGTTGTTGCTCTAGGTGCTGCCGTTCAGGCTGGTGTTTTGGCTGGAGACGTTAGTGACATTGTTCTATTGGACGTGAGTCCACTATCTTTGGGTCTTGAGACTCTTGGTGGTGTTATGACTAAAATTATCCCAAGAAACACTACACTTCCTACCTCCAAGTCAGAGGTGTTCTCCACAGCCGCTGATGGACAGACCAGCGTGGAGATTAATGTTCTTCAAGGAGAGCGAGAATTTGTGAGGGACAACAAATCACTTGGAAGCTTCCGACTAGATGGTATCCCACCTGCACCACGTGGGGTTCCCCAAATTGAAGTCAAATTTGACATCGACGCCAATGGAATCCTCTCTGTTACTGCGGTTGATAAAGGCACAGGCAAGAAGCAAGATATCACCATTACTGGTGCTAGCACGTTGCCCAGTGATGAGGTGGAACGGATGGTTAGCGAGGCGGATAAGTTTGCAAAGGAGGACAAGGAGAAGAGAGATGCTATTGACACGAAGAACCAGGCTGATTCTGTTGTGTACCAGACAGAGAAGCAGCTGAAGGAGCTTGGAGACAAGGTGCCCGGGCCAGTGAAGGAGAAGGTGGAATTGAAACTCGGAGAATTGAAGGATGCAATTTCAGGTGGGGCAACCCAAGCCATTAAGGATGCTATGGCTGCTCTGAACCAAGAGGTGATGCAGCTGGGGCAATCCTTGTACAATCAGCCGGGTGCCAGTGCCGGTGCCGGACCAAGCGAATCAGGGCCATCCGAACCATCAGGCAAAGGACCTGAAGGCGATGTTATTGATGCAGATTTTACCGATAGTAAATGA 2115 48.27 MASSTAQIHGLGAPSFAAASMRKPNRVSSRTLFFGSKLGNSSGFSSATFLKLRSDISRRSSSVRPLRVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDEESKQVSYRVVRDENGNVKLECPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKKSNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAANFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQANISLPFITATADGPKHIETTITRAKFEELCSDLLDRLKTPVENSLRDAKLSFKDIDEVILVGGSTRIPAVQELVKKMTGKEPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVSPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVTAVDKGTGKKQDITITGASTLPSDEVERMVSEADKFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPGPVKEKVELKLGELKDAISGGATQAIKDAMAALNQEVMQLGQSLYNQPGASAGAGPSESGPSEPSGKGPEGDVIDADFTDSK 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12401800 12405728 - MC04g0817 Mch4g1154 685866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1154 704 MobiDBLite consensus disorder prediction 666 704 - -
Mch4g1154 704 FunFam Molecular chaperone DnaK 74 260 - -
Mch4g1154 704 SUPERFAMILY Actin-like ATPase domain 72 252 IPR043129 -
Mch4g1154 704 FunFam Molecular chaperone DnaK 571 672 - -
Mch4g1154 704 PRINTS 70kDa heat shock protein signature 100 112 - -
Mch4g1154 704 PRINTS 70kDa heat shock protein signature 123 131 - -
Mch4g1154 704 PRINTS 70kDa heat shock protein signature 207 227 - -
Mch4g1154 704 PRINTS 70kDa heat shock protein signature 72 85 - -
Mch4g1154 704 PRINTS 70kDa heat shock protein signature 452 471 - -
Mch4g1154 704 PRINTS 70kDa heat shock protein signature 429 449 - -
Mch4g1154 704 PRINTS 70kDa heat shock protein signature 266 276 - -
Mch4g1154 704 PRINTS 70kDa heat shock protein signature 533 549 - -
Mch4g1154 704 PRINTS 70kDa heat shock protein signature 398 414 - -
Mch4g1154 704 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 444 569 IPR029047 -
Mch4g1154 704 Coils Coil 316 343 - -
Mch4g1154 704 Hamap Chaperone protein DnaK [dnaK]. 70 703 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Mch4g1154 704 PANTHER HEAT SHOCK PROTEIN 70KDA 73 631 IPR013126 GO:0005524(InterPro)|GO:0009507(PANTHER)|GO:0140662(InterPro)
Mch4g1154 704 ProSitePatterns Heat shock hsp70 proteins family signature 3. 401 415 IPR018181 -
Mch4g1154 704 ProSitePatterns Heat shock hsp70 proteins family signature 1. 76 83 IPR018181 -
Mch4g1154 704 FunFam Molecular chaperone DnaK 293 380 - -
Mch4g1154 704 Gene3D - 74 443 - -
Mch4g1154 704 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 571 677 IPR029048 -
Mch4g1154 704 NCBIfam molecular chaperone DnaK 72 667 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Mch4g1154 704 SUPERFAMILY Actin-like ATPase domain 255 446 IPR043129 -
Mch4g1154 704 Gene3D - 571 670 IPR029048 -
Mch4g1154 704 Gene3D Actin; Chain A, domain 4 293 380 - -
Mch4g1154 704 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 448 604 IPR029047 -
Mch4g1154 704 FunFam Stromal 70 kDa heat shock-related protein 444 569 - -
Mch4g1154 704 Pfam Hsp70 protein 73 667 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Mch4g1154 704 CDD HSPA9-Ssq1-like_NBD 71 446 - -
Mch4g1154 704 ProSitePatterns Heat shock hsp70 proteins family signature 2. 260 273 IPR018181 -
Mch4g1154 704 Gene3D - 249 430 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0385 Mch-Chr10:2560285 Mch4g1154 Mch-Chr4:12401800 1.46E-228 dispersed
Mch4g1154 Mch-Chr4:12401800 Mch6g1960 Mch-Chr6:22077131 8.29E-182 dispersed
Mch4g1154 Mch-Chr4:12401800 Mch4g2128 Mch-Chr4:23316148 5.25E-167 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1154 K03283 - csv:101210094 1226.08