Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch4g1416 | TCCGCCATGGAACATATCTTGGGTCTTCTCCGAATCCGAGTGCTGCGCGGTGTTAATTTGGCTGTTCGTGATACTCGCAGCAGCGATCCTTTTGTCGTCGTCACGATGGGCGAGCAGACTTTGAAGACTCATGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATCAGTTGACTCTTTCGATTGCGGATCTTAACATTCCAATCACTTTAGTAATGTTTGACAAAGACACACTAACAGACCATGACAAGATGGGAGATGCCGAGATCGACATCAAACCATACATAGAGTGTTTGAAGTTAGGACTGGAGAGCCTCCCAGATGGGTGTGTGGTTAAGAGAGTATATCCAAACAGAACAAACTGTTTATCGGATGAGAGCCAGTGTGTTTGGAACAAGGGGAAAATTGTACAGGACATGCACCTTAGGTTGAAGAATGTAGAGTGCGGTGAGGTGACGATACAGATCGAATGGATTGATGTTCCTGGTGCTAAGGGTTTG | 501 | 45.11 | SAMEHILGLLRIRVLRGVNLAVRDTRSSDPFVVVTMGEQTLKTHVVKNNCNPEWNDQLTLSIADLNIPITLVMFDKDTLTDHDKMGDAEIDIKPYIECLKLGLESLPDGCVVKRVYPNRTNCLSDESQCVWNKGKIVQDMHLRLKNVECGEVTIQIEWIDVPGAKGL | 167 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 17631385 | 17633745 | + | MC04g0973 | Mch4g1416 | 686128 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch4g1416 | 167 | SMART | C2_3c | 9 | 104 | IPR000008 | - | |
Mch4g1416 | 167 | Pfam | C2 domain | 8 | 94 | IPR000008 | - | |
Mch4g1416 | 167 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 5 | 160 | IPR035892 | - | |
Mch4g1416 | 167 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 3 | 165 | IPR044562 | - | |
Mch4g1416 | 167 | ProSiteProfiles | C2 domain profile. | 1 | 108 | IPR000008 | - | |
Mch4g1416 | 167 | Gene3D | C2 domain | 5 | 165 | IPR035892 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch3g1585 | Mch-Chr3:17807303 | Mch4g1416 | Mch-Chr4:17631385 | 1.04E-70 | dispersed | |
Mch4g1416 | Mch-Chr4:17631385 | Mch8g2285 | Mch-Chr8:25933817 | 3.07E-70 | dispersed | |
Mch9g1288 | Mch-Chr9:14944469 | Mch4g1416 | Mch-Chr4:17631385 | 5.09E-76 | transposed | |
Mch4g1416 | Mch-Chr4:17631385 | Mch6g0426 | Mch-Chr6:2834751 | 2.01E-71 | wgd |
Pathway information
