Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1416 TCCGCCATGGAACATATCTTGGGTCTTCTCCGAATCCGAGTGCTGCGCGGTGTTAATTTGGCTGTTCGTGATACTCGCAGCAGCGATCCTTTTGTCGTCGTCACGATGGGCGAGCAGACTTTGAAGACTCATGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATCAGTTGACTCTTTCGATTGCGGATCTTAACATTCCAATCACTTTAGTAATGTTTGACAAAGACACACTAACAGACCATGACAAGATGGGAGATGCCGAGATCGACATCAAACCATACATAGAGTGTTTGAAGTTAGGACTGGAGAGCCTCCCAGATGGGTGTGTGGTTAAGAGAGTATATCCAAACAGAACAAACTGTTTATCGGATGAGAGCCAGTGTGTTTGGAACAAGGGGAAAATTGTACAGGACATGCACCTTAGGTTGAAGAATGTAGAGTGCGGTGAGGTGACGATACAGATCGAATGGATTGATGTTCCTGGTGCTAAGGGTTTG 501 45.11 SAMEHILGLLRIRVLRGVNLAVRDTRSSDPFVVVTMGEQTLKTHVVKNNCNPEWNDQLTLSIADLNIPITLVMFDKDTLTDHDKMGDAEIDIKPYIECLKLGLESLPDGCVVKRVYPNRTNCLSDESQCVWNKGKIVQDMHLRLKNVECGEVTIQIEWIDVPGAKGL 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17631385 17633745 + MC04g0973 Mch4g1416 686128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1416 167 SMART C2_3c 9 104 IPR000008 -
Mch4g1416 167 Pfam C2 domain 8 94 IPR000008 -
Mch4g1416 167 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 160 IPR035892 -
Mch4g1416 167 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 165 IPR044562 -
Mch4g1416 167 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Mch4g1416 167 Gene3D C2 domain 5 165 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1585 Mch-Chr3:17807303 Mch4g1416 Mch-Chr4:17631385 1.04E-70 dispersed
Mch4g1416 Mch-Chr4:17631385 Mch8g2285 Mch-Chr8:25933817 3.07E-70 dispersed
Mch9g1288 Mch-Chr9:14944469 Mch4g1416 Mch-Chr4:17631385 5.09E-76 transposed
Mch4g1416 Mch-Chr4:17631385 Mch6g0426 Mch-Chr6:2834751 2.01E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1416 - - - 0.0