Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1417 ATGAAGAGGGAGCATCATCAGCTGCATCCCCCTCCGGAGCCTCCTTCCATGGCTGCCGCCTCTAATGGTGGAAAAGCAAAGCTCTGGGAGGAGGACGCCCACCTCGACGGTGGAATGGACGAGCTTCTTGCGGTTCTCGGGTACAAGGTTAAGTCGTCGGACATGGCGGAAGTTGCCCACAAGCTTGAACAGCTTGAACAAGCCATGGGTCAAGTTCAGGATACCGGGCTTTCGCATCTCGCTTTCGACACTGTTCATCATAATCCTTCTGATATATCCACTTGGCTTGAGAGTATGATCTCTGAGCTTAATCCGCCGCCTAATTTTGACCCGGCCTTGCCTGCGCCGCCGACGTTGGATGAGTCGTCGTTCTTGGCTCCGGCGGAATCCTCCACCATCACTTCCATTGATTACGAACCGCAACGGCAAACCAGCAGCCGGATTTTCGAGGTGTCCTCCAGCTCTGATTACGACCTCAAGGCTATTACGAGCAGCGCTAAGCGTTTGAAACCCTCGTCCGAGTCGGATTCGGATTTCTTCTCCAACTCGCCGATTGGGACGTCCGATTCCGCGACTCGCCCAGTCCTTCTCGTTGACTCGCAAGAGAACGGAATTCAACTGGTTCATGCTCTGATGGCTTGCGCAGAAGCCGTTCAGCAAAACAATCTGAATCTCGCGGAGGCTCTGGTGAAGCGAATCAGTTACTTGGCGGGTTCTCAAGCCGGAGCGATGCGGAAGGTCGCCACGTACTTCGCCGAAGCATTGGCTCGCCGAATCTACAGACTCTGCCCTGAGAATCCGCTCGATCACACAATCTCCGATATGCTTCAGATGCATTTCTACGAGAGCTGTCCGTATCTGAAATTCGCCCATTTCACCGCGAATCAAGCGATTCTCGAAGCCTTCGAAGGTAAGAATCGCGTTCACGTAATCGACTTCTCGATGAACCAAGGGATGCAGTGGCCGGCTCTGATTCAAGCCCTAGCTCTACGGCCGAGCGGTCCCCCGGTGTTCCGATTAACCGGAATCGGGCCGCCGGCGCCGGATAACTCCGATTACCTGCAAGAAGTCGGCTGGAAACTGGCTCAGTTGGCCGAAACGATCCACGTGGAGTTCGAGTACAGAGGATTCGTGGCGAACAGTTTGGCGGATCTGGACGCGTCTATGCTGGAGCTCCGGCCGAGCGAGGGGGAATCGGTGGTGGTGAACTCGGTGTTCGAGATGCACAAACTTCTGGGCCGGCCGGGCGCCATTGAGAAGGTTCTGTCGGTGGTGAAACAGATGAAGCCGGAGATCATGACGGTGGTGGAGCAAGAAGCGAACCACAACGGTCCGGTTTTCGTGGACCGGTTCACTGAGTCACTCCACTACTACTCGACGCTTTTCGACTCGCTGGAGGGATCGGTTAACAACCAGGACAAAATCATGTCCGAAATGTACCTCGGGAAGCAAATCTGCAACGTGGTGGCTTGCGAAGGCCCCGACCGAGTCGAGCGCCACGAGACGCTGGCTCAGTGGCGGGCTCGGTTTTCCTCCGCCGGGTTCGAGCCGGTCCACCTCGGCTCGAACGCATTCAAGCAAGCCAGCATGCTCCTCGCCCTCTTCGGCAGCGGAGAAGGGTATCAAGTTCAAGAGAACAACGGATCACTAACACTCGGGTGGCACACACGCCCACTCATCGCCACCTCCGCCTGGAAACTCGGCAACAACCCGGTGGCAGCTCAC 1725 56.41 MKREHHQLHPPPEPPSMAAASNGGKAKLWEEDAHLDGGMDELLAVLGYKVKSSDMAEVAHKLEQLEQAMGQVQDTGLSHLAFDTVHHNPSDISTWLESMISELNPPPNFDPALPAPPTLDESSFLAPAESSTITSIDYEPQRQTSSRIFEVSSSSDYDLKAITSSAKRLKPSSESDSDFFSNSPIGTSDSATRPVLLVDSQENGIQLVHALMACAEAVQQNNLNLAEALVKRISYLAGSQAGAMRKVATYFAEALARRIYRLCPENPLDHTISDMLQMHFYESCPYLKFAHFTANQAILEAFEGKNRVHVIDFSMNQGMQWPALIQALALRPSGPPVFRLTGIGPPAPDNSDYLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPSEGESVVVNSVFEMHKLLGRPGAIEKVLSVVKQMKPEIMTVVEQEANHNGPVFVDRFTESLHYYSTLFDSLEGSVNNQDKIMSEMYLGKQICNVVACEGPDRVERHETLAQWRARFSSAGFEPVHLGSNAFKQASMLLALFGSGEGYQVQENNGSLTLGWHTRPLIATSAWKLGNNPVAAH 575
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17650390 17652114 - MC04g0974 Mch4g1417 686129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1417 575 SMART DELLA_2 40 113 - -
Mch4g1417 575 Pfam GRAS domain family 207 566 IPR005202 -
Mch4g1417 575 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 172 565 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009723(PANTHER)|GO:0009737(PANTHER)|GO:0009863(PANTHER)|GO:0009867(PANTHER)|GO:0009938(PANTHER)|GO:0010187(PANTHER)|GO:0042538(PANTHER)|GO:0043565(PANTHER)|GO:2000033(PANTHER)|GO:2000377(PANTHER)
Mch4g1417 575 MobiDBLite consensus disorder prediction 166 185 - -
Mch4g1417 575 FunFam DELLA protein GAI 38 103 - -
Mch4g1417 575 ProSiteProfiles GRAS family profile. 198 566 IPR005202 -
Mch4g1417 575 Coils Coil 55 75 - -
Mch4g1417 575 MobiDBLite consensus disorder prediction 1 25 - -
Mch4g1417 575 Pfam Transcriptional regulator DELLA protein N terminal 40 107 IPR021914 -
Mch4g1417 575 Gene3D - 38 103 IPR038088 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0888 Mch-Chr2:6044081 Mch4g1417 Mch-Chr4:17650390 4.54E-46 dispersed
Mch4g1417 Mch-Chr4:17650390 Mch4g1687 Mch-Chr4:20041674 1.25E-231 dispersed
Mch4g1417 Mch-Chr4:17650390 Mch1g1496 Mch-Chr1:16458092 2.57E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43195 PF03514 GRAS 2.70E-138 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1417 K14494 - csv:101204164 983.015