Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1472 ATGGACACCATGGAGAGGGCAAGTTTTAGGCACACTGCATCTGCAGTAACAATCATGGCACATATTTTTGGTGTCACAGCCTGCATTCTTCTGCTTGTTTGGCTGCTGCATTATCGTGGCGGGCTCGGCTACGATTCTCCCAATCCCAACCTCGTCTTCAATTGCCACCCGTTCTTCATGCTCCTCGGTTTCGTGTTCGTGTCCGGGGAAGCAATGATGGCCTTCAAGACAGTGAGGGCAGATAAGATGGCGAGGAAAATAACTCACATGGGGCTGCATTTGGTAGCCATTTGCATGGGAATTGCTGGGATAAACGCTGCTTTCAAGTTTCATGATTTGGTGAACTTGGAAGATATGTTTAGTTTGCATTCATGGATTGGCATTGTCACCTTCTCCCTTTATGGCTTGCAGTGGGTTTTGGGGCTGTGTACATTCTTGTTTCCAGGAGCAGAGGCAAGTACAAAAGCCAAGCTGCTGCCATGGCACATCAGTGGGGGAAGGGCTCTGCTGCTGATGATAATATGCACAGCATTGACTGGTCTATCTCAGAAGGCTACTTCTCTCAAATTGGTAGCTAACCATGAGTCTCGTCTCCTCAACTTCACTGCTTTCTTTGTCCTCCTCTTTGGCATCTCCATCAACATCGTTGTCGGTTTTGCTAGGCACCCCAATATCCCGCTCTAG 684 48.39 MDTMERASFRHTASAVTIMAHIFGVTACILLLVWLLHYRGGLGYDSPNPNLVFNCHPFFMLLGFVFVSGEAMMAFKTVRADKMARKITHMGLHLVAICMGIAGINAAFKFHDLVNLEDMFSLHSWIGIVTFSLYGLQWVLGLCTFLFPGAEASTKAKLLPWHISGGRALLLMIICTALTGLSQKATSLKLVANHESRLLNFTAFFVLLFGISINIVVGFARHPNIPL 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18201696 18204213 - MC04g1016 Mch4g1472 686184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1472 227 Pfam Eukaryotic cytochrome b561 56 186 IPR006593 -
Mch4g1472 227 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Mch4g1472 227 FunFam Cytochrome b reductase 1 10 225 - -
Mch4g1472 227 PANTHER CYTOCHROME B561-RELATED 13 217 IPR043205 GO:0016491(InterPro)|GO:0016491(PANTHER)
Mch4g1472 227 Gene3D - 9 221 - -
Mch4g1472 227 CDD Cyt_b561_ACYB-1_like 46 189 - -
Mch4g1472 227 SMART 561_7 55 181 IPR006593 -
Mch4g1472 227 ProSiteProfiles Cytochrome b561 domain profile. 19 218 IPR006593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1472 Mch-Chr4:18201696 Mch9g1251 Mch-Chr9:14298809 3.24E-59 dispersed
Mch4g1472 Mch-Chr4:18201696 Mch4g2425 Mch-Chr4:25229350 4.42E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1472 K08360 - csv:101208884 384.03