Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1515 ATGAATGGAGATGTAGCTGCAGCAGCAGGGGCGGCTGCTCCGGCCGAGGCCCAGTACGTGAGGGCCAAGACCTCTGTATGGTGGGACATCGAGAACTGTCAGGTCCCCAAGAGCTGCGATCCTCACGCCATCGCCCAAAACATCAGCTCCGCCCTCGTTAACATTAACTATTGCGGTCCCGTTTCCATCTCCGCTTATGGAGATACCAATCGAATTCCCAATTCTATTCAGCAAGCTCTCTCCAGTACTGGCATCGCCTTAAATCACGTCCCTGCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTAGTTGATATGCTGTTTTGGGCTGTTGATAACCCTGCTCCTGCAAATTATTTACTAATATCCGGTGATAGAGATTTTTCTAATGCACTTCATCAATTAAGAATGAGAAGATATAATATTCTTCTAGCACAGCCACAAAAAGCTTCTGCACCACTAGTCGCAGCAGCAAAGAGTGTTTGGCTTTGGATGAGTCTATCAGCTGGAGGACCCCCAATATCTAGTGCTGAATCATCTCAACTTGCGAATGGTATCCCTACTTCTGACCCTCAAATATCACATAACTCTGGATTTGATCATAATCAGACAGCTCAAGCTATGGTTTGCAAACCTGAAAATGTCTCTTTGGGAAACCAAAGACCTTATTCTACTGAGAGGATGGGTGATAACAAACAAAAAGGCAAAAATATACAGAAAACCTCCAACCAACCAGTCCTATTCAGAGCTTTAAGCTCGCCTGTTTCTATGCAAGAGCAAAACCTTAATTTTTTAAACCAACCGAATCATATGCAAGCAAAGCAGTTTAAGAAAGCACCCCATGAATTCTTTGGTAGCAGCAATCCTGCCGCCTCAGCTTGTCAGTCTACTCCAAACCTTTTTATTGAAAGTTCCAATCAATTTAGGAATGATGGCAATAATTTCATGGGTAGTTCCTCCAATTACAAGCCTCCTCACATGAGGCAAAACAACATGCAGTTCCATCCTTCTTTTCGACCAGATAATGTTTTTCCTCCTAATTCCCATAATCATAATTCTTTTCCAGTCCCTGGTCAACCTGATCTCTCTGCACCAAATATTAATAAGCTACATATCTCTGATTATCCCAATTATGCTACGAATCCTCCAAATTTTCATCACCAAGCAGGTGAATTTAGACCGCATACCAAGTCTCAAGATCCAGGTAATTTTAACTTACCAGACAGAGGCCGTAGTCAGCATGGTGGTCAGTCATTTCAACATGATGGGTTGGATAATAGATCTGCTCGTAATGTAGTAGAGTATGGGGCTCATTCATCTTCCACAACTGTTCCTAAAAGTTTTTCTTATAATGATGGCTGGGGATCTCAAGGGCAATCACCACCACCTTCTGAGTACATTCAAGGCCTTATTGGAGTTATTCTTCTTGCATTAAACACCCTGAAAATGGAAAAAATTATGCCAACTGAGGCAAATATAGTTGACTGCATCCGATATGGAGATTTGAAAAACTGCAATACCGATGTAAAAATGGCACTAGATAGTGGGATTGAGCATAATATGGTAGTGAAGCAGAATTTAGGAGCAGTGCAATTGTATGTTGGTAAGACTGAAAAATTGTGGAAGTGTGTAAACCCTCTAGGTGGGCATCCTAATCAGTACCAAAAAGCTATATGGGATAGGATTCAAAAGTTTTTGGCTTCTCCAGCTGGTCGTTGTGCAATATTGGCTTCTCGTTGCAGATATGAGGCAGCATTGATTCTGAGGAAAGAATGTTTAGTAGATTTTGCCTTGGGCGATGTGCTTCAGATTTTGAATATAATAACCTCAGTGAAGAAATGGATTTTTCATCATGCTTCAGGATGGCAGCCAATTAATATTGCACTAACAGAAGGTAATATGGATGCAAGTTCCAGAACTGAACTTGATTTTATCAACACGAGTACCAATTAA 1953 41.58 MNGDVAAAAGAAAPAEAQYVRAKTSVWWDIENCQVPKSCDPHAIAQNISSALVNINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWMSLSAGGPPISSAESSQLANGIPTSDPQISHNSGFDHNQTAQAMVCKPENVSLGNQRPYSTERMGDNKQKGKNIQKTSNQPVLFRALSSPVSMQEQNLNFLNQPNHMQAKQFKKAPHEFFGSSNPAASACQSTPNLFIESSNQFRNDGNNFMGSSSNYKPPHMRQNNMQFHPSFRPDNVFPPNSHNHNSFPVPGQPDLSAPNINKLHISDYPNYATNPPNFHHQAGEFRPHTKSQDPGNFNLPDRGRSQHGGQSFQHDGLDNRSARNVVEYGAHSSSTTVPKSFSYNDGWGSQGQSPPPSEYIQGLIGVILLALNTLKMEKIMPTEANIVDCIRYGDLKNCNTDVKMALDSGIEHNMVVKQNLGAVQLYVGKTEKLWKCVNPLGGHPNQYQKAIWDRIQKFLASPAGRCAILASRCRYEAALILRKECLVDFALGDVLQILNIITSVKKWIFHHASGWQPINIALTEGNMDASSRTELDFINTSTN 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18611118 18615399 + MC04g1051 Mch4g1515 686227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1515 650 MobiDBLite consensus disorder prediction 334 426 - -
Mch4g1515 650 MobiDBLite consensus disorder prediction 176 243 - -
Mch4g1515 650 MobiDBLite consensus disorder prediction 398 425 - -
Mch4g1515 650 Gene3D - 17 166 - -
Mch4g1515 650 PANTHER LIMKAIN B LKAP 14 521 IPR024768 GO:0005777(InterPro)|GO:0010468(InterPro)
Mch4g1515 650 MobiDBLite consensus disorder prediction 334 359 - -
Mch4g1515 650 CDD PIN_limkain_b1_N_like 23 147 - -
Mch4g1515 650 Pfam OST-HTH Associated domain 578 630 IPR025677 -
Mch4g1515 650 Pfam NYN domain 23 159 IPR021139 GO:0004540(InterPro)
Mch4g1515 650 MobiDBLite consensus disorder prediction 176 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g1702 Mch-Chr2:15590785 Mch4g1515 Mch-Chr4:18611118 4.99E-38 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1515 - - - 0.0