Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1566 ATGGGCGTCGCTCTCGAGTCCTCGCAGTTCCATGTTCTTGCTGTTGATGATAGCTTCATCGACAGGAAATTGATCGAGCGCCTCCTCCAGACCTCCTCCTATCACGTTACTGCTGTTGATTCCGGTAGCAAGGCCTTGGAATTTCTCGGTCTTCTTCAAGAACATGATGATGAAACAGACTCCAAAATCCACTCGAATCATCATCAAGAAGTGGAAGTAAATCTGATCATTACAGATTACAGTATGCCTGGAATGAGTGGCTACGATCTCCTCCGGAGGATCAAGGAATCAAAATCGCTTAAAGACATACCAGTTGTGATAATGTCTTCGGAGAACGTCCCGTCGAGAATAAACAGATGCTTGGAAGAAGGAGCGGAAGAGTTCTTCCTCAAACCAGTTCAATTGTCAGATGTGAGGAAGCTGAGACCTCATTTGGTCAAAGAAAGATCCGGAAGAACTTGA 462 45.45 MGVALESSQFHVLAVDDSFIDRKLIERLLQTSSYHVTAVDSGSKALEFLGLLQEHDDETDSKIHSNHHQEVEVNLIITDYSMPGMSGYDLLRRIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLVKERSGRT 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 18960438 18961998 + MC04g1086 Mch4g1566 686278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1566 153 Gene3D - 11 152 - -
Mch4g1566 153 Pfam Response regulator receiver domain 12 139 IPR001789 GO:0000160(InterPro)
Mch4g1566 153 CDD REC_typeA_ARR 12 141 - -
Mch4g1566 153 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 147 IPR045279 GO:0009736(InterPro)
Mch4g1566 153 SMART REC_2 10 142 IPR001789 GO:0000160(InterPro)
Mch4g1566 153 SUPERFAMILY CheY-like 9 141 IPR011006 -
Mch4g1566 153 ProSiteProfiles Response regulatory domain profile. 11 146 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1566 Mch-Chr4:18960438 Mch4g1781 Mch-Chr4:20749729 1.11E-57 dispersed
Mch4g1566 Mch-Chr4:18960438 Mch1g0440 Mch-Chr1:8680262 6.41E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43206 PF00072 Response_reg 2.10E-21 CL0304 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1566 K14492 - csv:101210839 260.766