Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1577 ATGGGCAAGAAGAAGGGGTGGTTTTATTTAGTCAAGAGGCTATTTGTTTCAGAGGAACAGCCAAAGCCTGAGAAGAAGCAGAAGAGATGGAAATGGGTGTTTGGAAGGCTAAAGAACAAGAGATTAGTCACACTGACAGCGCCATCGCCACCGAAAGTGGCGATGAGCCGAGAGGAAGCAGAGGAGGAAGAGGAGAGGAAGCAGGCTCTTTCAGTGGCCATTGCGAGTACTGCAGCGGCCGAAGCGGCGGTTGCAGCCGCCAAGGCTGCTGTTGAGGTTGTTTGGCTCACAGGGACCCCTCAATCTCAGCATCAAGAGGCTGCACAAGAAGCCTTTAAACCTCTCAAGAAGGCCCCTCCATATGATCTCCATAAACGTGAAAGGGAAATCCATGAATTTGCTGCTATTACTATCCAAACTGCTTTCCGTGGCTTCCTTGCAAGGAAAGCATTGCGAGCACTGAAAGGAATAGTGAGGCTTCAGGCAATTATCAGAGGGAGAGCTGTTAGGCGCCAAGCCATTGCCACCTTGAAGTGCTTGCAGTCCATCGTTAGCATACAATCTCAAGTCTGTTCAAATCGACTCCATCCTTCTCAAAACACATTCCATTCTCCTGAAACCAGACAGTTGCAGAGCTTGAAAGATAGGATTTTAAAGTTGGATTCGGACGGTCAAAGGTGGGATGATAGCCTATTATCAAAAGAAGAGGCGGATGCCGTGTTCTTGAGTAGGAAAGAAGCAGTGATCAGGCGAGAGCGAGTCAAGGAATACTTGTTCGCCCACAGGAGATCTGCAGAATCAGAACGAAAGAAGGTAAGAGGAAGATGGAGATACTGGCTAGACCAATGGGTCGATACCCAACTCTCCAAAAGCAAAGAACTCGAAGATTTGGACTCCATTTTCACCTCAAACCCAAAACACAAAGAAACAGACGGATTCAGCGCAAACCCAACAAAAAACACGGATCATCGAGCCACAGAACTCCCCAACCAATCTCCATCCCCAAAACCAGTTCTGAGAAAACTCTCTCACCACAAGAAGCAGCATTCACTGGGGGGCGGCGTGGACTTAAACAACTCATTTTCAAGCTCCCCGCTCGCGCCCACTTACATGGCCGCCACAGAATCTGCAAAGGCAAAGGCCAGGTCCCTGAGCTCGCCGAAGCTAAGGCCGGCGGGGGGTTTGGACACGTGCTCCGATGGAAACTCGCCGTGCAAGACGAAGCAGCTGTGTTTGGTGTCTTCAACGGCGAGTGAAGTGGCGATTGGCGGCGGCAGAAGGGGGTTCCAGTTCCAGCAGCAGCAGCGGTCGCCGGGTCTAAAAGGGCTTCCGGGGCCTACGAGATCGAGCAGAACTCTCAAGGATTTGAGCATTGATTCGGAGCATTCATTGCCAAATTGGGATGGACGAAGTTCCTTCCAATGA 1425 50.6 MGKKKGWFYLVKRLFVSEEQPKPEKKQKRWKWVFGRLKNKRLVTLTAPSPPKVAMSREEAEEEEERKQALSVAIASTAAAEAAVAAAKAAVEVVWLTGTPQSQHQEAAQEAFKPLKKAPPYDLHKREREIHEFAAITIQTAFRGFLARKALRALKGIVRLQAIIRGRAVRRQAIATLKCLQSIVSIQSQVCSNRLHPSQNTFHSPETRQLQSLKDRILKLDSDGQRWDDSLLSKEEADAVFLSRKEAVIRRERVKEYLFAHRRSAESERKKVRGRWRYWLDQWVDTQLSKSKELEDLDSIFTSNPKHKETDGFSANPTKNTDHRATELPNQSPSPKPVLRKLSHHKKQHSLGGGVDLNNSFSSSPLAPTYMAATESAKAKARSLSSPKLRPAGGLDTCSDGNSPCKTKQLCLVSSTASEVAIGGGRRGFQFQQQQRSPGLKGLPGPTRSSRTLKDLSIDSEHSLPNWDGRSSFQ 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19064676 19068568 + MC04g1096 Mch4g1577 686289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1577 474 ProSiteProfiles IQ motif profile. 155 182 - -
Mch4g1577 474 ProSiteProfiles IQ motif profile. 131 159 - -
Mch4g1577 474 Pfam Protein of unknown function (DUF4005) 357 434 IPR025064 -
Mch4g1577 474 MobiDBLite consensus disorder prediction 381 400 - -
Mch4g1577 474 MobiDBLite consensus disorder prediction 302 357 - -
Mch4g1577 474 Gene3D - 131 181 - -
Mch4g1577 474 Coils Coil 53 73 - -
Mch4g1577 474 Pfam IQ calmodulin-binding motif 134 152 IPR000048 GO:0005515(InterPro)
Mch4g1577 474 MobiDBLite consensus disorder prediction 306 337 - -
Mch4g1577 474 PANTHER IQ-DOMAIN 5-RELATED 11 406 - -
Mch4g1577 474 MobiDBLite consensus disorder prediction 428 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1577 Mch-Chr4:19064676 Mch7g0083 Mch-Chr7:896691 1.05E-21 dispersed
Mch4g1577 Mch-Chr4:19064676 Mch4g2077 Mch-Chr4:22941834 2.60E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1577 - - - 0.0