Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1589 ATGCCAGACGTGCAAGCCGTTGTGAATGATTTCGTTATCAAGCTTAAGAAGCGTAAAATCGAGGGCTCCCTGGCCACTGCGAAGCTTACAGCTGAATTGCTTCGTTCAGTCATTTCGCAGCAGCGAATACCCTACACGAATCAGGCTGCCGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGTGTTTTGCACATTATTAGAGAGGAGGATCTCTCTCTCACCACAGCTGCTATTGCCGGGTTGAGCTTATCAGCAGTTAGTGATGATGAGGATGACATTGAAAAAGATGATCGCCCGGCCCTGTCAGCCGCTGCTGTTGCAGCTGCTGCAAGAAGCACTCTGCGGCCACCTTCCTTGCAAACTCTTCTTGAGGACGTTCCTAACCAAACATCTATCCATCAAACTTCATCATCTGGAGGTGATTCAGAAGGAAAAAGCAAATCTGCTGATAAGAGTTCGAGGAGTCGGAAACTCAAGCACGATGTAATTGAAGCTGTTAATGAACTCATTCAAGATATTGCAACATGTCACGAACAGATTGCTGAGCAAGCAGTGGAACACATCCATCAAAATGAGGTAATATTAACTCTCGGGAGTTCCAGAACAGTTTTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAGAGGTCCTTCCGGGTGTTTGTTGCTGAGGGTGCTCCGAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAAACCACACTTATTACTGATTCTGCAGTTTTTGCCATGATCTCCCGGGTGAATATGGTTATAGTTGGAGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCTGTTGGGTTGAATATGGTTGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTTGTACTAGCCGGTAGTCATAAGTTATGCCCTTTGTATCCACACAATCCTGAAGTTCTACTCAATGAACTGAGATCCCCATCAGAGCTACTTGACTTTGGTGAATTTTCAGATTGCATGGACTTTGGAACTAACACTGGTTCTCCTCTTCTCCATGTAGTCAACCCAACATTTGACTATGTGCCACCATCGCTTGTTAGTTTATTTATTACTGACACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTGCTGATTACTATTCAGCTGATGATTTGGTGGTTAAACGAAGGCCTCCTACAGGGAGCTGA 1254 45.37 MPDVQAVVNDFVIKLKKRKIEGSLATAKLTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTAAIAGLSLSAVSDDEDDIEKDDRPALSAAAVAAAARSTLRPPSLQTLLEDVPNQTSIHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNTGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLVVKRRPPTGS 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19141489 19154613 + MC04g1108 Mch4g1589 686301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1589 417 FunFam translation initiation factor eIF-2B subunit beta 194 402 - -
Mch4g1589 417 MobiDBLite consensus disorder prediction 162 176 - -
Mch4g1589 417 MobiDBLite consensus disorder prediction 143 176 - -
Mch4g1589 417 MobiDBLite consensus disorder prediction 143 161 - -
Mch4g1589 417 Gene3D - 194 401 IPR042529 -
Mch4g1589 417 Pfam Initiation factor 2 subunit family 165 389 IPR000649 GO:0044237(InterPro)
Mch4g1589 417 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 3 408 IPR051855 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
Mch4g1589 417 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 406 IPR037171 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1589 Mch-Chr4:19141489 Mch9g0176 Mch-Chr9:1329699 1.10E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1589 K03754 - csv:101220366 741.495