Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1596 ATGGCGCTCTACGATAAACCCTCCCACCAATCTCTGATCCCCAGCTTCCTCTATTCTTCCCCTTCTTCCACTCGAACCATGCCGCTCAAGAAGATGCTTCAGACTTCTCCGAGCGTCGATGCTGTTTCCTCTTCCCCCAAGAGCTTTGTCATTCCGGCCCCGAGCGAGCCGTCTAAGAAGATCGAGATGTATTCGCCGGCTTTCTACGCCGCTTGCACTTTCGGTGGAATTCTCAGCTGTGGTCTCACGCACATGGCTGTTACCCCTCTCGACTTGGTTAAATGCAATATGCAGATTGACCCTGCAAAATACAAAAGCATTTCGTCTGGTTTTGGAGTTCTGCTCAAGGAGCAGGGTGTTAAGGGTTTCTTTAGGGGATGGGTGCCTACCCTCCTTGGCTACAGCGCACAGGGTGCCTGCAAATTTGGTTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCAGCTAAGTACAAGACCCTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTGATTGCGGATGTTGCGCTTTGCCCTTTTGAAGCAGTGAAGGTTCGGGTTCAGACTCAGCCTGGTTTTGCTAGAGGACTTTCAGATGGGCTTCCTAAGTTTGTCAGATCTGAAGGAGCTCTAGGATTGTACAAGGGTATTGTTCCTCTATGGGGACGCCAGATTCCATATACAATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGATATACAAGTATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATCGTGTCCCATCCTGCTGATAATCTCGTGTCGTTCCTCAACAATGCCAAAGGAGCAACCGTTGGCGATGCTGTCAAGAAGCTCGGATTATGGGGTCTCTTCACCCGTGGGCTACCCCTCCGTATTGTTATGATTGGAACTCTTACTGGCGCTCAGTGGGGTCTTTACGATGCATTCAAAGTATTTGTTGGACTGCCTACTACTGGTGGTGTTGCTCCTGCCGCCCCCGCACCTGCTGCTTCTGAGCTTGCAAAAGCGTGA 1107 49.59 MALYDKPSHQSLIPSFLYSSPSSTRTMPLKKMLQTSPSVDAVSSSPKSFVIPAPSEPSKKIEMYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGLYDAFKVFVGLPTTGGVAPAAPAPAASELAKA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19201590 19205844 - MC04g1115 Mch4g1596 686308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1596 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 46 354 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Mch4g1596 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Mch4g1596 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Mch4g1596 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Mch4g1596 368 FunFam Phosphate carrier protein, mitochondrial 67 345 - -
Mch4g1596 368 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
Mch4g1596 368 Pfam Mitochondrial carrier protein 69 154 IPR018108 -
Mch4g1596 368 Pfam Mitochondrial carrier protein 165 251 IPR018108 -
Mch4g1596 368 Gene3D Mitochondrial carrier domain 68 344 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0389 Mch-Chr4:2478189 Mch4g1596 Mch-Chr4:19201590 1.44E-101 dispersed
Mch4g1596 Mch-Chr4:19201590 Mch6g0021 Mch-Chr6:140791 1.44E-194 dispersed
Mch4g1596 Mch-Chr4:19201590 Mch8g1355 Mch-Chr8:10052420 8.41E-212 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1596 K15102 - csv:101221771 673.7