Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1635 AACAATGGCTCCATAATCGACCGCCACAACCACCACCAGCAGCAGCCGCAGCAGCAGGCGGCTGTTAATGGCGTTCTTGCTGTCAAGAAACCGCCCTCCAAGGACCGCCATAGCAAGGTCGACGGCCGCGGCCGCCGGATTCGGATGCCGATCATTTGCGCCGCTCGTGTTTTCCAGCTCACCCGTGAGTTGGGCCACAAATCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAAGCCGAGCCCTCCATCATCGCCGCCACCGGCACCGGCACCACTCCGGCCAGCTTCTCCACTATCTCTGGATCTCTCCGGGGAGTTGTTGGCTGCTCCACCTCCCTCTCTTCCTCTTCCTCTCTTGACCATAAGCCCCTTTTGGCTCCCGCGCCGTTTATTCTCGGGAAGCGCGTCCGGACCGATGATGACGGTGGGAGTAAAGACGACGGCGGCGGAGGAGGAGGCATTTCGGTGGGTCCGACTGTCGGTTCGATTATGGGCCCTGCGGCGGCGGGTGGGTACTGGGCGATTCCGGCCAGGCCAGATTTTGGGCAGGTTTGGAGCTTCGCTGCGGCGGCGGCTGCTGCGGCGCCGGAAATGGTGCTTCAGCCGGCGGCGGTTTCTCATCAGGCGTCGCTGTTTGTTCAGCAGCAGTCGATCGGCGAGGCGTCGGCGGCGAAAGTCGGGAATTACCTTCCGGGGCATCTGAATTTGCTGGCTTCTTTATCGGGCCCCGGAAGTTCTGGCCGGAGAGAC 753 62.95 NNGSIIDRHNHHQQQPQQQAAVNGVLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISGSLRGVVGCSTSLSSSSSLDHKPLLAPAPFILGKRVRTDDDGGSKDDGGGGGGISVGPTVGSIMGPAAAGGYWAIPARPDFGQVWSFAAAAAAAAPEMVLQPAAVSHQASLFVQQQSIGEASAAKVGNYLPGHLNLLASLSGPGSSGRRD 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19547238 19547990 - MC04g1150 Mch4g1635 686347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1635 251 MobiDBLite consensus disorder prediction 138 158 - -
Mch4g1635 251 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Mch4g1635 251 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 142 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0042752(PANTHER)|GO:0043565(PANTHER)
Mch4g1635 251 Pfam TCP family transcription factor 33 107 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch2g0336 Mch-Chr2:2484298 Mch4g1635 Mch-Chr4:19547238 1.85E-24 dispersed
Mch4g1635 Mch-Chr4:19547238 Mch9g2143 Mch-Chr9:22181244 2.70E-33 dispersed
Mch4g1635 Mch-Chr4:19547238 Mch9g1660 Mch-Chr9:18669790 8.79E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43212 PF03634 TCP 3.50E-31 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1635 K16221 - csv:101214586 311.227