Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1663 ATGTCTAAAGAGGAGATAATCATTTTGGACTGTTTGCTCAGCCCATTCTGTTGTAGGGTTAAGATTGCTTTGAATGAGAAGGGATTGGGTTATGAGAGTAGAGAAGAGGATTTGTTTGGTTGGAAATGTGGGAAAAGTGAGTTGTTGCTCAAATCCAACCCTGTTTACAAGAAAGTGCCTGTTCTCTTGCACAATGGGAAGCCATTGAATGAAAGCTCCATCATTGTTCACTATATTGATGAGACTTGGCCTTCCCCTTCTCCTCTTCTTCCTTCTTCGCCGTACGAAAGAGCTCAAGCTCGGTTCTGGATTGACTACATCGATAAAAAGGTATTTGAAACGGGTTCCAAAATCTGGAGGAGCAACGGAGACGAGCAAGAGGGAGCAAAGAAGGAGTTCCTAGAGATTGTGAAGCAATTGGAGGAAGCTTTAGGGGACAAAGATTTCTTTGGAGGTGAAAGGTTGGGGATTGTGGATGTGATTGCAATCCCATTGACAAGTTGGTTCTATGCTTATGAGAAAGTTGGAAACTTTAAAGTGGAAGAACACAGCCCCAAGTTGTCAGCTTGGCAAAAGAGATGTTTGCTAAAGGAGAGTGTGGGCAGTGCCATTTCTTGCCCTACGAAGGTCTATGAGTTTGTCACCTCCATGAGAAAGAACCTAGGGCTTGAA 672 43.6 MSKEEIIILDCLLSPFCCRVKIALNEKGLGYESREEDLFGWKCGKSELLLKSNPVYKKVPVLLHNGKPLNESSIIVHYIDETWPSPSPLLPSSPYERAQARFWIDYIDKKVFETGSKIWRSNGDEQEGAKKEFLEIVKQLEEALGDKDFFGGERLGIVDVIAIPLTSWFYAYEKVGNFKVEEHSPKLSAWQKRCLLKESVGSAISCPTKVYEFVTSMRKNLGLE 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19818072 19819416 - MC04g1178 Mch4g1663 686375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1663 224 CDD GST_N_Tau 6 83 - -
Mch4g1663 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 87 IPR004045 -
Mch4g1663 224 SFLD Main (cytGST) 2 221 - -
Mch4g1663 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 217 IPR010987 -
Mch4g1663 224 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Mch4g1663 224 SUPERFAMILY Thioredoxin-like 12 111 IPR036249 -
Mch4g1663 224 CDD GST_C_Tau 95 217 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Mch4g1663 224 SUPERFAMILY GST C-terminal domain-like 81 220 IPR036282 -
Mch4g1663 224 Gene3D Glutaredoxin 2 92 - -
Mch4g1663 224 FunFam Glutathione S-transferase GSTU6 1 90 - -
Mch4g1663 224 Gene3D - 93 224 - -
Mch4g1663 224 Pfam Glutathione S-transferase, N-terminal domain 11 85 IPR004045 -
Mch4g1663 224 Pfam Glutathione S-transferase, C-terminal domain 120 195 IPR004046 -
Mch4g1663 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 214 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Mch4g1663 224 FunFam Glutathione S-transferase U20 93 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1005 Mch-Chr10:7210860 Mch4g1663 Mch-Chr4:19818072 6.32E-86 dispersed
Mch4g1663 Mch-Chr4:19818072 Mch5g0151 Mch-Chr5:1000589 2.02E-45 dispersed
Mch4g1663 Mch-Chr4:19818072 Mch3g1747 Mch-Chr3:18855913 1.05E-42 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1663 K00799 - csv:101213628 380.948