Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1670 GATGCCAATCCCGCGGTACCAGATCACGATCATCATCCTGATGCAGCAGCCGCGCCCACGGACGACGCCGATGTAAAATCTGAAGAAAAATTGGAGGATCGGGAGCTGGAGCTGGAGCAGGATCAAGATCAAGACCATGAGAAGAAGGAGGATGGAAAGGAGGAGGAGGAAAAGAAGGATCAGGAGGAAGAGTCGTCCCAGCAGGATGAACCGGATCTTCATTATGATCTCCACACCATCCTTGAAGATGTCGATCAATTTCTCCGCGATTCTCGAGATCGGGAGGATGATGCTGTGGTGGAGATTCCGAGGTTCATCGACAAATTCTTGGATCTCGTGGATGCGAAGATTGAGCAATATAATAACGATGCAGAATCGAACGCGAAAGAGAGAGAGTGTCGGGTGCCAGAGGACGAATCGTCGTTTCTGGAAGCTGTCGATCGGTTATCGAAGCTCAATAATGCACTCCGCGAAATGAAATTGGAAGAGGAGAAGAAATCGTTGATTAACCGCGTCGGGAGCATTGAACAGAGAGCAATTTCTTATTTGGAGGAGGAGTTCCGATTCTTTCTTGAGGAATCCTCCCGAAGCAGTAGCGACACGGATCCTGCTGCCGAAACAGATCGCAGTGACGCTGAATCCGATCAACTTCATTTTCCAGGTTACTCCGACGAGATCGTGAGGTATTTGAATAAAATCGCCAAGGCAATGATTGCCAGTGGATACGAATCAGAATGTTGCCAGGTTTACATGGTTGCGAGAAGAAATATATTCGAGGAAGCCTTACAGAAGCTAGGGTTCGAGAAACACAGCATCGACGACATCCAGAAGATGAGTTGGGAATCAATGGAGAGGGAGATCGCTACGTGGGTCAAAACCTTCAAGCAATGCGCCACAATTTTGTTCTCTGGCGAACGGAAGCTCGCCGAATCTGTATTTTCAGAGTATCCTGAACTCACCGATAGCCTGTTCAGCAATCTGACTCGCGGCATTGTGATTCAGCTCCTAAATTTCTCGGAAGGAGTTGCGATGACGAAGCGCTCCGCCGAGAAATTGTTCAAGCTTCTTGACATGTACGAAGCTCTCCGCGACATGGTCCCAAAAATGGAGGACTTATTTCCAGAGGAATCCGCCAACGAGCTCAAAACAGAGACCACAACTGCTCGCGCTCGTCTCGGCGAGGCCGCGATTAGTATATTCGGCGATCTCGAAAACTCGATCAAAGCAGACACCGGAAAAACTCCGGTACCGGGCGGTGCCGTCCATCCATTGACTCGATACACCATAAACTACTTGAAATATGCTTGCGAGTACAAGAACACTCTGGAACAGATTTTCAAAGAACATTCGAAGATCGAGCGAGCCGATTCCACCAGCCGGCCACATTTTGAGGGCGAACAAGCCCCAAACTACCAATCAAGCAGCGACAACCAATCGCCATTCGCCGTGGAACTGACGAAGGTGATGGAACTCCTGGACTCAAATCTGGAAGCGAAATCGAAGCTATACAGAGACATAGCCCTGAGTTCGATCTTCATGATGAACAACGGGCGATACATCTTGCAGAAGATCAAAGGATCCGCAGAGATCCACGAACTGGTGGGCGATACGTGGTACCGTAAGAGATCTTCGGATCTGCGTCAGTACCACAAGAATTACCAGCGAGAGACGTGGAGCAGACTGTTGAGTTGCTTAAACCACGAGGGATTGACGGTGCACGGGAAAGTGGTAAAGCCAGTGCTGAAGGAGAGGTTTAAAAGCTTCAACACCATGTTCGATGAGATCCACAGGACGCAGAGCTTGTGGGTGATCAGCGACGAGCAGCTTCAATCGGAGATCAGAGTATCGATATCGGCGGTGATGATTCCGGCCTACAGATCATTCCTAGGCAGGTTTTCACAGTACTTGGATCCGGGGAGACAAACGGAGAAGTACATCAAGTTTCAACCTGAAGACATCGAAACTTACATTGACGATCTATTCGATGGAAACCCAACCATGGCAAGAAGGAGA 2013 49.13 DANPAVPDHDHHPDAAAAPTDDADVKSEEKLEDRELELEQDQDQDHEKKEDGKEEEEKKDQEEESSQQDEPDLHYDLHTILEDVDQFLRDSRDREDDAVVEIPRFIDKFLDLVDAKIEQYNNDAESNAKERECRVPEDESSFLEAVDRLSKLNNALREMKLEEEKKSLINRVGSIEQRAISYLEEEFRFFLEESSRSSSDTDPAAETDRSDAESDQLHFPGYSDEIVRYLNKIAKAMIASGYESECCQVYMVARRNIFEEALQKLGFEKHSIDDIQKMSWESMEREIATWVKTFKQCATILFSGERKLAESVFSEYPELTDSLFSNLTRGIVIQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMVPKMEDLFPEESANELKTETTTARARLGEAAISIFGDLENSIKADTGKTPVPGGAVHPLTRYTINYLKYACEYKNTLEQIFKEHSKIERADSTSRPHFEGEQAPNYQSSSDNQSPFAVELTKVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSAEIHELVGDTWYRKRSSDLRQYHKNYQRETWSRLLSCLNHEGLTVHGKVVKPVLKERFKSFNTMFDEIHRTQSLWVISDEQLQSEIRVSISAVMIPAYRSFLGRFSQYLDPGRQTEKYIKFQPEDIETYIDDLFDGNPTMARRR 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19888351 19890363 - MC04g1185 Mch4g1670 686382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1670 671 Pfam Exo70 exocyst complex subunit C-terminal 289 659 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Mch4g1670 671 Pfam Exocyst complex component Exo70 N-terminal 110 192 - -
Mch4g1670 671 MobiDBLite consensus disorder prediction 41 78 - -
Mch4g1670 671 MobiDBLite consensus disorder prediction 1 33 - -
Mch4g1670 671 SUPERFAMILY Cullin repeat-like 137 662 IPR016159 -
Mch4g1670 671 MobiDBLite consensus disorder prediction 453 477 - -
Mch4g1670 671 MobiDBLite consensus disorder prediction 1 78 - -
Mch4g1670 671 Gene3D Exocyst complex component Exo70 117 671 - -
Mch4g1670 671 MobiDBLite consensus disorder prediction 463 477 - -
Mch4g1670 671 MobiDBLite consensus disorder prediction 194 217 - -
Mch4g1670 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 70 664 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch4g1670 671 FunFam Exocyst subunit Exo70 family protein 125 669 - -
Mch4g1670 671 Coils Coil 142 178 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0050 Mch-Chr3:528490 Mch4g1670 Mch-Chr4:19888351 2.75E-118 dispersed
Mch4g1670 Mch-Chr4:19888351 Mch5g0938 Mch-Chr5:6972480 1.36E-202 dispersed
Mch4g1670 Mch-Chr4:19888351 Mch6g0064 Mch-Chr6:380659 3.82E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1670 K07195 - csv:101206040 1013.45