Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1713 ATGGGTTCTTTGCCTTCTGAAACTTTGGCCCTCGAAATGACAGAGACCCATCTTAATGTCGGAGACAGCCGCGCCGGCGCCGGCGCCGGAGCAGAGACCGCTCAATGGCTGCTCAATTCTCCCGACCCTCCAACTCTGTGGGAAGAAATTGTCGGCGCCGTCAAAGAGAATGCCATTCCCCGCAGTTGCACAGAGGCCCCCACGGCGAAGAAGAAGAAGAAGAAAAGCACTTCTTCAAGCTCTGGAAAACAGAACATTTTCAAAACCGCAGTTTCCCTTCTGCAGAAAGCGCTTCCAATCCTCAGCTTGAGCAGAAATTACAAAGCTTCCAAGTTCAGAAACGACCTCATGGCTGGTTTAACACTCGCCAGTCTCAGCATCCCTCAGAGTATTGGGTATGCTAATTTGGCAAAGCTTGATCCTCAGTTCGGTCTATACACAAGTGCTGTTCCTCCTCTAATCTATGCATTAATGGGGAGCTCGAGAGAGATAGCCATTGGCCCAGTGGCTGTGGTTTCTCTGCTTCTGTCGTCCATGCTTCAAGAAATTCAAGATCCTGTTTCAGACCCAGTTGCCTACAGAAGGCTTGTTTTCACTGTTACTTTCTTTGCAGGAACTTTCCAAGCTGCATTTGGACTATTGAGGTTGGGTTTTCTTGTGGATTTTCTCTCTCATGCTGCCATTGTTGGGTTCATGGCTGGCGCAGCCATTCTCATTGGTCTTCAGCAAATGAAAGGTCTACTGGCCATCAGCAACTTCACAACAAAAACTGATTTGGTCTCGGTTTTGGAATCTGTTGTGAAATCTGTTCACCAGCCTTGGTACCCTTTGAACATTGTCCTTGGCTGCTCATTCCTGATCTTTCTCCTTGTAGCCAGGTTCATTGGCAGAAGGAAGAAGAAGCTGTTCTGGGTGTCAGCCATTGCTCCTCTCATATCTGTTATTCTCTCCACTTTGATAGTGTTTCTATCAAGAGCTGACAAACATGGAGTTAAGATTGTGAAGCAAGTTAAAGAAGGCCTAAACCCAATCTCCATTCATCAGCTGCAATTCAACAGCCCAACTGTTGGAATAGCTGCCAAAGTTGGCCTCATTGCTTCCATTATTGCTCTCACAGAAGCCTTAGCGGTCGGCCGATCCTTCGCGTCGATTAAAGGCTACAACCTTGATGGGAACAAGGAGATGATTGCTATGGGCCTCATGAACATAACAGGCTCTCTAACCTCTTGCTACCTGGCCACTGGGTCATTCTCAAGAACAGCAGTGAATTTTAGTGCCGGATGTGAGAGTGTGATGTCAAATATTGTGATGGCAGTAACAGTGATGGTGATGCTGCAGTTCTTCACGCGGTTCCTCTACTTCACTCCAATGGCCATATTGGCTTCAATCATTCTCTCTGCACTGCCTGGCCTCATTGACATTAATGAAGCTCTCCACATCTGGAAGGTTGACAAGCTTGATTTTCTAGCCTGCCTTGGCGCCTTCCTTGGTGTCTTGTTTCATTCAGTGGAATTTGGTCTCATTGTGGCGGTGGGAATTTCATTTGCAAAGATATTGTTGATCTCAATCCGACCAGCCACAGAAGAGGTGGGAAGGCTGCCAAGAAGTGACATATTTTGCAACATGAAGCAATTCCCAATGGCCATGAAAACTCAAGGAATCTCCATTATCAGAATAAACTCTGGCTTGCTTTGTTTTGCCAATGCCAGTTTCATCAAAGAGAGGATAATGAGATTGGTAGAAGCAGATCAAGATAATGATGATGATGTTGAAGAAACAACAAAAGAGCAACCAAAACAAGTAGTTGTTGACATGTGCAATGTTATGAATATCGACACATCAGGAATCATTGCTTTAGAGGAACTTCACAAAAAATTATTATTGAACGACATACGACTAACAATAGCATGTCCAAAATGGGAAGTGATTCACAAACTAAAAAAAACCAACTTTGTGGAAAGAATTGAAGGAAGGATCTTCCTATCAGTTGGTGAAGCTGTGGATTCATGCCTTGAAAATGCATCCAAATTGCCTTCTCTAGTTACCAAAGTCATTGTGAATTGA 2064 44.86 MGSLPSETLALEMTETHLNVGDSRAGAGAGAETAQWLLNSPDPPTLWEEIVGAVKENAIPRSCTEAPTAKKKKKKSTSSSSGKQNIFKTAVSLLQKALPILSLSRNYKASKFRNDLMAGLTLASLSIPQSIGYANLAKLDPQFGLYTSAVPPLIYALMGSSREIAIGPVAVVSLLLSSMLQEIQDPVSDPVAYRRLVFTVTFFAGTFQAAFGLLRLGFLVDFLSHAAIVGFMAGAAILIGLQQMKGLLAISNFTTKTDLVSVLESVVKSVHQPWYPLNIVLGCSFLIFLLVARFIGRRKKKLFWVSAIAPLISVILSTLIVFLSRADKHGVKIVKQVKEGLNPISIHQLQFNSPTVGIAAKVGLIASIIALTEALAVGRSFASIKGYNLDGNKEMIAMGLMNITGSLTSCYLATGSFSRTAVNFSAGCESVMSNIVMAVTVMVMLQFFTRFLYFTPMAILASIILSALPGLIDINEALHIWKVDKLDFLACLGAFLGVLFHSVEFGLIVAVGISFAKILLISIRPATEEVGRLPRSDIFCNMKQFPMAMKTQGISIIRINSGLLCFANASFIKERIMRLVEADQDNDDDVEETTKEQPKQVVVDMCNVMNIDTSGIIALEELHKKLLLNDIRLTIACPKWEVIHKLKKTNFVERIEGRIFLSVGEAVDSCLENASKLPSLVTKVIVN 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20250577 20255936 - MC04g1219 Mch4g1713 686425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1713 687 NCBIfam sulfate permease 99 664 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch4g1713 687 ProSitePatterns SLC26A transporters signature. 141 162 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Mch4g1713 687 Pfam Sulfate permease family 112 492 IPR011547 GO:0016020(InterPro)
Mch4g1713 687 Pfam STAS domain 547 666 IPR002645 -
Mch4g1713 687 SUPERFAMILY SpoIIaa-like 551 670 IPR036513 -
Mch4g1713 687 PANTHER SULFATE TRANSPORTER 71 672 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch4g1713 687 Gene3D STAS domain 524 674 IPR036513 -
Mch4g1713 687 MobiDBLite consensus disorder prediction 62 82 - -
Mch4g1713 687 ProSiteProfiles STAS domain profile. 561 670 IPR002645 -
Mch4g1713 687 CDD STAS_SulP_like_sulfate_transporter 545 661 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1713 Mch-Chr4:20250577 Mch9g0897 Mch-Chr9:6980842 7.25E-190 dispersed
Mch4g1713 Mch-Chr4:20250577 Mch4g1714 Mch-Chr4:20274672 1.44E-203 tandem
Mch10g0703 Mch-Chr10:4856867 Mch4g1713 Mch-Chr4:20250577 1.70E-269 transposed
Mch11g0790 Mch-Chr11:5322321 Mch4g1713 Mch-Chr4:20250577 2.16E-213 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1713 K17469 - csv:101211892 1070.46