Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1714 ATGTCGTGGCAGCCAAACAGGGCGGTGAACAAGTTACTAATGGATTCTAGGCATCATTCCAATGGGGGAGAACTTGAAACAAAAGAGATGGACATTAGAAGTCTTTCATCCTCACGCAACAATACTCAATACATTCACAAGGTGGGGGTTCCACCGAAGCAAAATTTCTTCAAAGAATTTAAAGCCAGGGTGAAAGAGACTTTCTTTGCTGATGATCCTCTGCGAACGTTCAAGGATCAATCCAAGTCCCGAAAGTTTATCCTGGGAATTCAGGCTATTTTCCCAATATTTGAATGGGGGAGGAATTACAATCTGACAAAATTTAGAGGTGATCTGCTCGCTGGGCTCACTATTGCAAGTCTGTGTATTCCACAGGATATAGGGTATGCAAAGCTTGCTAATTTGGCTCCCCAGTATGGATTATACTCCAGTTTTGTTCCTCCACTGGTTTATGCTGTGATGGGTAGCTCAAGAGACATAGCGATTGGACCAGTGGCTGTTGTTTCTCTCTTGCTGGGAACACTGCTTCAAAGGGAGATTGATCAACATACACATCCAGAAGAGTATGTGCGGCTTGCATTTACAGCTACCTTTTTTGCTGGGATCACCCAAGCCACGCTAGGGATTCTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCACGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCCATCACTATTGCCCTTCAACAGCTTAAAGGTTTTCTTGGCATTGCAAAATTTACGAAGAAAACAGATATTATCTCTGTAATGCGCTCAGTATTTGAGGCAGCGCATCATGGATGGAACTGGCAGACTATAGTCATTGGAGTATCTTTTCTAAGCTTTCTTCTATTAGCTAAGTATATTGGAAAGAAGAATAGAAGCCTCTTTTGGGTGCCGGCAATTGCCCCACTAATATCAGTTATTCTGTCCACCTTTTTTGTTTACATTACCCATGCAGACAAGAAAGGTGTTGCAATTGTGAAACACATAGAGAAAGGTATCAATCCCTCATCAGTGAAGCAAATATACTTCACTGGTGACAACCTCCTTAAAGGATTCAGGATTGGCGTTGTGGCTGGTATGATAGCCTTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTTCCATGAAGGATTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTGGGAACAATGAATGTTATTGGTTCAATGACTTCCTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCGGCTGTGAATTACATGTCTGGCTGCCAAACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTGTTTCTAACTCTAGAGTTCATCACTCCCCTTTTCAAGTACACTCCAAATGCTATTCTCTCTGTCATCATTATCTCTGCTGTGATCAACTTGATCGACTTTCAGGCAGCAATTTTGCTTTGGAAGATTGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTCGGTGTTATTTTTGTAAATGTTGAGATAGGCCTCCTAATTGCTGTCTCTATATCATTTGCTAAGATACTCTTACAAGTAACTAGGCCACGGGTTGCGGTACTAGGGAAGATCCCTAGGACCACAGTGTACAGAAACACCCAACAATATCCAGAAGCAACAAGGGTTCCTGGCATTCTAATTGTCAGAGTCGATTCGGCTATTTACTTTTCTAACTCCAATTATATCAAAGATAGGATATTGAGATGGTTGTCTGATGAGGAAGAACAAATAAAGAAGACTTATTCACCAAGAACTCAGTTTTTGATTGTTGAGATGTCTCCCGTTACCGACATTGACACTAGCGGCATTCATGCTTTGGAAGAGCTACATAGGAGTCTCCAGAAAAGAGATATTCAGCTTGTTCTGGCAAATCCCGGGCCAGTAGTAATCGACAAACTCTTCATGTCCGATCTTGCAAATGTAATTGGTGAGGACCATATCTTTCTGACGGTTGCCGAGGCTGTTGCGTCCTGCTCCCCAAAATTGGCGGAAGAGGCCTAG 2016 42.56 MSWQPNRAVNKLLMDSRHHSNGGELETKEMDIRSLSSSRNNTQYIHKVGVPPKQNFFKEFKARVKETFFADDPLRTFKDQSKSRKFILGIQAIFPIFEWGRNYNLTKFRGDLLAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLQREIDQHTHPEEYVRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIAKFTKKTDIISVMRSVFEAAHHGWNWQTIVIGVSFLSFLLLAKYIGKKNRSLFWVPAIAPLISVILSTFFVYITHADKKGVAIVKHIEKGINPSSVKQIYFTGDNLLKGFRIGVVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSMTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFITPLFKYTPNAILSVIIISAVINLIDFQAAILLWKIDKFDFVACLGAFFGVIFVNVEIGLLIAVSISFAKILLQVTRPRVAVLGKIPRTTVYRNTQQYPEATRVPGILIVRVDSAIYFSNSNYIKDRILRWLSDEEEQIKKTYSPRTQFLIVEMSPVTDIDTSGIHALEELHRSLQKRDIQLVLANPGPVVIDKLFMSDLANVIGEDHIFLTVAEAVASCSPKLAEEA 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20274672 20281469 + MC04g1220 Mch4g1714 686426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1714 671 NCBIfam sulfate permease 95 659 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Mch4g1714 671 ProSitePatterns SLC26A transporters signature. 137 158 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Mch4g1714 671 SUPERFAMILY SpoIIaa-like 542 664 IPR036513 -
Mch4g1714 671 Gene3D STAS domain 520 666 IPR036513 -
Mch4g1714 671 PANTHER SULFATE TRANSPORTER 61 663 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Mch4g1714 671 Pfam STAS domain 541 659 IPR002645 -
Mch4g1714 671 CDD STAS_SulP_like_sulfate_transporter 541 656 - -
Mch4g1714 671 MobiDBLite consensus disorder prediction 1 28 - -
Mch4g1714 671 MobiDBLite consensus disorder prediction 12 28 - -
Mch4g1714 671 FunFam Sulfate transporter 31 520 666 - -
Mch4g1714 671 ProSiteProfiles STAS domain profile. 540 663 IPR002645 -
Mch4g1714 671 Pfam Sulfate permease family 108 488 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0790 Mch-Chr11:5322321 Mch4g1714 Mch-Chr4:20274672 0 dispersed
Mch4g1714 Mch-Chr4:20274672 Mch9g0897 Mch-Chr9:6980842 1.07E-247 dispersed
Mch4g1713 Mch-Chr4:20250577 Mch4g1714 Mch-Chr4:20274672 1.44E-203 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1714 K17470 - csv:101212138 1187.94