Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch4g1725 | ATGCATCATCTGCCTCAGTTTTTCTCTCCTAGGAAGCGAACCAAGCGCATGGATCCGAGGAAAATCGGAGGGAAACCCAAGCTTGGCCGGGTTAATGCGGCCAAGAACATCGAGTATGACGCTGCGTCCTCCTCTTCTTCGCAAGAGGATTCCACTAGGTCTCTCTACACTCGGTCCATGGAATCGCCGGATCCGTCCAGCTTCCGGGTTGAAGGAATTGACGACGAATTTTATCGGTTGTGTTGGAGTTTGGGGCTATCGGGCCCCGAAGACTTTGCGATTCCGACGGCGGCTTGGGAGGCCAGAAAGGCTCTCTCCTCTTCGGATCTTCTACCGAGGTCTAGGCTGCATCCCATGGACAGCCCGAAGAGCGAGGAGGGTAAGGAGAAGGAGGATAAGGAAGACAAAGATATGGAAGAGGAACTGTGTCGGAGGGTTAAGGATTCAGTTCGAATTACCCTCGAGCAAGAGACGCCTAAAACCGAACTTCGCGAGCTAAACGAGCGCCGTATGGCTACTGCTACTGGATGTAGCTCCAGAAGTGGAATCAATGGCGCTCGGCCTCCCCTACTTAAGCCGCCGCCGGCCATGCGGCTTCCAGTTTATAATGATTGCTCCACTTGGGACATTCTGAAATCGTTTGCTCCATTAGTTGATGGGGAAGATGAAAAACAGGATGAAGTACGAGAGCGCAGCGAACCATTACTTGAAAGAGAAGCAGAAGGAAATCTAGTCCGGCACGGGGAGTCGATCATGGAATCGAATTGGGGTTCCTTCACTTCGAATGACGACGATTCTTCGAGCAGTACCACGGAGCCTGCAAATATTTCACCCAATTTGAGATGTAAACCCATCATCACATCCTGGGTAACGGGAAAGCTTCTTGGGCGCGGTTCATTTGGAGCAGTATTCGAAGCAATTTCAGAGGACGGGACCTTTTTTGCACTCAAGGAAGTTTCACTGCTTGATGAAGACAGTCAAGGAAGACAAAGTATCTATCAACTTCAGCAGGAGATAGCACTTCTAAGTGAGTTTCAGCATGAGAACATAGTCCAGTACTACGGCACGCATACGGATGAGTCAAAACTCTATATCTTCCTTGAGCTTGTATCTCAAGGCTCCCTTATGAGCCTATATCAGAGGATTCATCTCTTGGACTCCCACGTTTCTAATTATACCAGACAAATTCTGTTTGGTTTAAAGTATCTTCATGAGCGAAATGTGGTTCACAGGGATATCAAGTGCGCTAACATACTGGTGGATGTGAATGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCAAAGGCAACAAAATTGAATGATGTCAAATCGTGCAAAGGAACTGCATTCTGGATGGCACCTGAGGTGGTTAATGGGAAGGGCCAAGGATACGGTCTTCCGGCCGATATCTGGAGCCTTGGGTGTACAGTTCTAGAAATGTTAACTCGAAAGCTTCCATACTCGGAACTCGAAAGTCATATGCAGGCACTATTTAAGATCGGAAAAGGTGTAGCGCCTTCGGTTCCCGAGTCTCTCTCAAAAGATGGACAGGATTTTATTCTGCAGTGCCTACAAGTTAATCCGCGCGACCGTCCTGCTGCTGCTGATCTTCTTAATCATCCATTTGTGAGAAGACCAGTTTCCAGTTTATCAGGGTCGGCATCTCCTTACAACAGGCCAGGCAGAAGGAATTAA | 1695 | 48.38 | MHHLPQFFSPRKRTKRMDPRKIGGKPKLGRVNAAKNIEYDAASSSSSQEDSTRSLYTRSMESPDPSSFRVEGIDDEFYRLCWSLGLSGPEDFAIPTAAWEARKALSSSDLLPRSRLHPMDSPKSEEGKEKEDKEDKDMEEELCRRVKDSVRITLEQETPKTELRELNERRMATATGCSSRSGINGARPPLLKPPPAMRLPVYNDCSTWDILKSFAPLVDGEDEKQDEVRERSEPLLEREAEGNLVRHGESIMESNWGSFTSNDDDSSSSTTEPANISPNLRCKPIITSWVTGKLLGRGSFGAVFEAISEDGTFFALKEVSLLDEDSQGRQSIYQLQQEIALLSEFQHENIVQYYGTHTDESKLYIFLELVSQGSLMSLYQRIHLLDSHVSNYTRQILFGLKYLHERNVVHRDIKCANILVDVNGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVNGKGQGYGLPADIWSLGCTVLEMLTRKLPYSELESHMQALFKIGKGVAPSVPESLSKDGQDFILQCLQVNPRDRPAAADLLNHPFVRRPVSSLSGSASPYNRPGRRN | 564 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 20390179 | 20396501 | + | MC04g1231 | Mch4g1725 | 686437 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch4g1725 | 564 | Pfam | Protein kinase domain | 291 | 543 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch4g1725 | 564 | ProSitePatterns | Protein kinases ATP-binding region signature. | 295 | 317 | IPR017441 | GO:0005524(InterPro) | |
Mch4g1725 | 564 | MobiDBLite | consensus disorder prediction | 110 | 141 | - | - | |
Mch4g1725 | 564 | Gene3D | Transferase(Phosphotransferase) domain 1 | 288 | 557 | - | - | |
Mch4g1725 | 564 | ProSiteProfiles | Protein kinase domain profile. | 289 | 543 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch4g1725 | 564 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 408 | 420 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch4g1725 | 564 | MobiDBLite | consensus disorder prediction | 38 | 64 | - | - | |
Mch4g1725 | 564 | SUPERFAMILY | Protein kinase-like (PK-like) | 267 | 546 | IPR011009 | - | |
Mch4g1725 | 564 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Mch4g1725 | 564 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 69 | 545 | IPR050538 | - | |
Mch4g1725 | 564 | FunFam | Mitogen-activated protein kinase 1, putative, expressed | 287 | 555 | - | - | |
Mch4g1725 | 564 | MobiDBLite | consensus disorder prediction | 116 | 141 | - | - | |
Mch4g1725 | 564 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Mch4g1725 | 564 | SMART | serkin_6 | 289 | 543 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch4g1725 | 564 | MobiDBLite | consensus disorder prediction | 255 | 277 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch4g1725 | Mch-Chr4:20390179 | Mch6g2443 | Mch-Chr6:26371577 | 1.01E-72 | dispersed | |
Mch4g1725 | Mch-Chr4:20390179 | Mch10g0143 | Mch-Chr10:856718 | 5.90E-73 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77345 | PF00069 | Pkinase | 1.20E-68 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch4g1725 | K13414 | - | csv:101218538 | 866.685 |