Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch4g1725 ATGCATCATCTGCCTCAGTTTTTCTCTCCTAGGAAGCGAACCAAGCGCATGGATCCGAGGAAAATCGGAGGGAAACCCAAGCTTGGCCGGGTTAATGCGGCCAAGAACATCGAGTATGACGCTGCGTCCTCCTCTTCTTCGCAAGAGGATTCCACTAGGTCTCTCTACACTCGGTCCATGGAATCGCCGGATCCGTCCAGCTTCCGGGTTGAAGGAATTGACGACGAATTTTATCGGTTGTGTTGGAGTTTGGGGCTATCGGGCCCCGAAGACTTTGCGATTCCGACGGCGGCTTGGGAGGCCAGAAAGGCTCTCTCCTCTTCGGATCTTCTACCGAGGTCTAGGCTGCATCCCATGGACAGCCCGAAGAGCGAGGAGGGTAAGGAGAAGGAGGATAAGGAAGACAAAGATATGGAAGAGGAACTGTGTCGGAGGGTTAAGGATTCAGTTCGAATTACCCTCGAGCAAGAGACGCCTAAAACCGAACTTCGCGAGCTAAACGAGCGCCGTATGGCTACTGCTACTGGATGTAGCTCCAGAAGTGGAATCAATGGCGCTCGGCCTCCCCTACTTAAGCCGCCGCCGGCCATGCGGCTTCCAGTTTATAATGATTGCTCCACTTGGGACATTCTGAAATCGTTTGCTCCATTAGTTGATGGGGAAGATGAAAAACAGGATGAAGTACGAGAGCGCAGCGAACCATTACTTGAAAGAGAAGCAGAAGGAAATCTAGTCCGGCACGGGGAGTCGATCATGGAATCGAATTGGGGTTCCTTCACTTCGAATGACGACGATTCTTCGAGCAGTACCACGGAGCCTGCAAATATTTCACCCAATTTGAGATGTAAACCCATCATCACATCCTGGGTAACGGGAAAGCTTCTTGGGCGCGGTTCATTTGGAGCAGTATTCGAAGCAATTTCAGAGGACGGGACCTTTTTTGCACTCAAGGAAGTTTCACTGCTTGATGAAGACAGTCAAGGAAGACAAAGTATCTATCAACTTCAGCAGGAGATAGCACTTCTAAGTGAGTTTCAGCATGAGAACATAGTCCAGTACTACGGCACGCATACGGATGAGTCAAAACTCTATATCTTCCTTGAGCTTGTATCTCAAGGCTCCCTTATGAGCCTATATCAGAGGATTCATCTCTTGGACTCCCACGTTTCTAATTATACCAGACAAATTCTGTTTGGTTTAAAGTATCTTCATGAGCGAAATGTGGTTCACAGGGATATCAAGTGCGCTAACATACTGGTGGATGTGAATGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCAAAGGCAACAAAATTGAATGATGTCAAATCGTGCAAAGGAACTGCATTCTGGATGGCACCTGAGGTGGTTAATGGGAAGGGCCAAGGATACGGTCTTCCGGCCGATATCTGGAGCCTTGGGTGTACAGTTCTAGAAATGTTAACTCGAAAGCTTCCATACTCGGAACTCGAAAGTCATATGCAGGCACTATTTAAGATCGGAAAAGGTGTAGCGCCTTCGGTTCCCGAGTCTCTCTCAAAAGATGGACAGGATTTTATTCTGCAGTGCCTACAAGTTAATCCGCGCGACCGTCCTGCTGCTGCTGATCTTCTTAATCATCCATTTGTGAGAAGACCAGTTTCCAGTTTATCAGGGTCGGCATCTCCTTACAACAGGCCAGGCAGAAGGAATTAA 1695 48.38 MHHLPQFFSPRKRTKRMDPRKIGGKPKLGRVNAAKNIEYDAASSSSSQEDSTRSLYTRSMESPDPSSFRVEGIDDEFYRLCWSLGLSGPEDFAIPTAAWEARKALSSSDLLPRSRLHPMDSPKSEEGKEKEDKEDKDMEEELCRRVKDSVRITLEQETPKTELRELNERRMATATGCSSRSGINGARPPLLKPPPAMRLPVYNDCSTWDILKSFAPLVDGEDEKQDEVRERSEPLLEREAEGNLVRHGESIMESNWGSFTSNDDDSSSSTTEPANISPNLRCKPIITSWVTGKLLGRGSFGAVFEAISEDGTFFALKEVSLLDEDSQGRQSIYQLQQEIALLSEFQHENIVQYYGTHTDESKLYIFLELVSQGSLMSLYQRIHLLDSHVSNYTRQILFGLKYLHERNVVHRDIKCANILVDVNGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVNGKGQGYGLPADIWSLGCTVLEMLTRKLPYSELESHMQALFKIGKGVAPSVPESLSKDGQDFILQCLQVNPRDRPAAADLLNHPFVRRPVSSLSGSASPYNRPGRRN 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20390179 20396501 + MC04g1231 Mch4g1725 686437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch4g1725 564 Pfam Protein kinase domain 291 543 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1725 564 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524(InterPro)
Mch4g1725 564 MobiDBLite consensus disorder prediction 110 141 - -
Mch4g1725 564 Gene3D Transferase(Phosphotransferase) domain 1 288 557 - -
Mch4g1725 564 ProSiteProfiles Protein kinase domain profile. 289 543 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1725 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch4g1725 564 MobiDBLite consensus disorder prediction 38 64 - -
Mch4g1725 564 SUPERFAMILY Protein kinase-like (PK-like) 267 546 IPR011009 -
Mch4g1725 564 MobiDBLite consensus disorder prediction 1 68 - -
Mch4g1725 564 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 69 545 IPR050538 -
Mch4g1725 564 FunFam Mitogen-activated protein kinase 1, putative, expressed 287 555 - -
Mch4g1725 564 MobiDBLite consensus disorder prediction 116 141 - -
Mch4g1725 564 MobiDBLite consensus disorder prediction 1 20 - -
Mch4g1725 564 SMART serkin_6 289 543 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch4g1725 564 MobiDBLite consensus disorder prediction 255 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1725 Mch-Chr4:20390179 Mch6g2443 Mch-Chr6:26371577 1.01E-72 dispersed
Mch4g1725 Mch-Chr4:20390179 Mch10g0143 Mch-Chr10:856718 5.90E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77345 PF00069 Pkinase 1.20E-68 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch4g1725 K13414 - csv:101218538 866.685